C9orf117

GENERAL INFORMATION

? »

Gene name

C9orf117

Gene description

Chromosome 9 open reading frame 117

Protein class

Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

3
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

? »

RNA tissue category

HPA:Tissue enriched (fallopian tube)
GTEx:Group enriched (cervix, uterine, fallopian tube, hippocampus, lung, testis)

Protein evidence

Evidence at protein level

Protein localization

Selective expression in cilia in fallopian tube, respiratory tract and endometrium.

ANTIBODY RELIABILITY

? »

Data reliability
description

Antibody staining mainly consistent with RNA expression data.

Data reliability

Supportive based on 2 antibodies.
HPA021474 , HPA021786
SHOW MORE

RNA AND PROTEIN EXPRESSION SUMMARY

? »
RNA expression (FPKM) Protein expression (score)
Brain
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Adipose & soft tissue
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis

Fallopian tube



PROTEIN EXPRESSION OVERVIEW

? »

Organ

Expression



RNA EXPRESSION OVERVIEW

? »
HPA dataset
RNA tissue category:  Tissue enriched (fallopian tube)

Organ

Expression

GTEx dataset
RNA tissue category:  Group enriched (cervix, uterine, fallopian tube, hippocampus, lung, testis)

Organ

Expression



GENE INFORMATION

? »

Gene name

C9orf117

Synonyms

Description

Chromosome 9 open reading frame 117 (HGNC Symbol)

Entrez gene summary

Chromosome

9

Cytoband

q34.11

Chromosome location (bp)

127706989 - 127716002

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000160401 (version 78.38)

Entrez gene

286207

UniProt

Q5JU67 (UniProt - Evidence at transcript level)

neXtProt

NX_Q5JU67

Antibodypedia

C9orf117 antibodies


PROTEIN BROWSER

? »
 
 
 
ENST00000373295
 
ENST00000461104
 
ENST00000614677
 
 
 
 


PROTEIN INFORMATION

? »

Splice variant

Ensembl

UniProt

Protein class

Gene ontology

Length
(aa)

Molecular mass
(kDa)

Signal peptide
(predicted)

Transmembrane regions
(predicted)

C9orf117-001 ENSP00000362392
ENST00000373295
Q5JU67
Show all »
Show » 520 60.5 No 0
C9orf117-004 ENSP00000485445
ENST00000461104
Show » 137 15.2 No 0
C9orf117-201 ENSP00000478313
ENST00000614677
Q5JU67
Show all »
Show » 425 49.9 No 0