SHC1

SOFT TISSUE - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:78.6 FPKM
GTEx:59.6 RPKM

SOFT TISSUE 1 - Immunohistochemistry

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Annotated protein
expression

Adipocytes:Low
Chondrocytes:Low
Fibroblasts:Low
Peripheral nerve:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA001844

 

Antibody CAB005374

 

Antibody CAB016305

 

Adipocytes

Not detected   Low   Medium  

Chondrocytes

Medium   Not available   Not available  

Fibroblasts

Not detected   Medium   Medium  

Peripheral nerve

Not detected   Not detected   Not detected  
     
     
     

SOFT TISSUE 2 - Immunohistochemistry

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Annotated protein
expression

Adipocytes:Low
Chondrocytes:Not available
Fibroblasts:Low
Peripheral nerve:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA001844

 

Antibody CAB005374

 

Antibody CAB016305

 

Adipocytes

Not detected   Medium   Low  

Chondrocytes

Not available   Not available   Not available  

Fibroblasts

Not detected   Not detected   High  

Peripheral nerve

Not available   Low   Not available  
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

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Average FPKM

78.6

N/A Female, age 80
Sample 1
FPKM: 91.2
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
FPKM: 50.8
N/A Female, age 57
Sample 3
FPKM: 59.4
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 4
FPKM: 113.0
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

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Average RPKM

59.6

GTEx sample id

RPKM

 

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 54.1
Samples: 350

Max RPKM: 117.5
Min RPKM: 24.8
Std RPKM: 16.2
Median RPKM: 50.5
GTEX-QEG5-0326-SM-2S1PB 117.5
GTEX-ZTX8-1526-SM-5N9GI 116.6
GTEX-11P82-1726-SM-5Q5AT 108.0
GTEX-NPJ8-0226-SM-48TBN 103.1
GTEX-S3XE-1626-SM-3K2AJ 102.6
GTEX-11O72-0226-SM-59869 101.9
GTEX-WH7G-2226-SM-3NMBN 94.7
GTEX-14BMU-2126-SM-5S2TS 93.0
Show all
 

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 65.1
Samples: 227

Max RPKM: 123.5
Min RPKM: 30.2
Std RPKM: 19.9
Median RPKM: 61.4
GTEX-Y8LW-0926-SM-4VBQ8 123.5
GTEX-11P82-0326-SM-5HL51 113.4
GTEX-XUJ4-1726-SM-4BONW 113.4
GTEX-13O21-3126-SM-5J1OI 111.1
GTEX-13S86-0926-SM-5SI6I 108.3
GTEX-11WQK-1526-SM-5EGKN 108.0
GTEX-ZTSS-1026-SM-5985N 106.7
GTEX-14B4R-0526-SM-5QGQT 106.5
Show all