RNASEK-C17orf49

GENERAL INFORMATION

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Gene name

RNASEK-C17orf49

Gene description

RNASEK-C17orf49 readthrough

Protein class

Predicted membrane proteins

Predicted localization

Membrane

Number of transcripts

1
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HUMAN PROTEIN ATLAS INFORMATION

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RNA tissue category

HPA:Tissue enhanced (testis)

Protein evidence

Evidence at protein level

Protein localization

Ubiquitous nuclear expression.

ANTIBODY RELIABILITY

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Data reliability
description

Antibody staining mainly consistent with RNA expression data. Pending external verification. Caution, targets protein from more than one gene.

Data reliability

Uncertain based on 2 antibodies.
HPA022961 , HPA024457
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RNA AND PROTEIN EXPRESSION SUMMARY

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RNA expression (FPKM) Protein expression (score)
Brain
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Adipose & soft tissue
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis

Skin



PROTEIN EXPRESSION OVERVIEW

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Organ

Expression



RNA EXPRESSION OVERVIEW

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HPA dataset
RNA tissue category:  Tissue enhanced (testis)

Organ

Expression



GENE INFORMATION

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Gene name

RNASEK-C17orf49

Synonyms

Description

RNASEK-C17orf49 readthrough (HGNC Symbol)

Entrez gene summary

This locus represents naturally occurring read-through transcription between the neighboring RNASEK (ribonuclease, RNase K) and C17orf49 (chromosome 17 open reading frame 49) genes. The read-through transcript is a candidate for nonsense-mediated mRNA decay (NMD) and is unlikely to produce a protein product. [provided by RefSeq, Jan 2011]

Chromosome

17

Cytoband

p13.1

Chromosome location (bp)

7012635 - 7017520

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000161939 (version 78.38)

Entrez gene

100529209

UniProt

neXtProt

Antibodypedia

RNASEK-C17orf49 antibodies


PROTEIN BROWSER

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ENST00000547302
 
 
 
 


PROTEIN INFORMATION

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Splice variant

Ensembl

UniProt

Protein class

Gene ontology

Length
(aa)

Molecular mass
(kDa)

Signal peptide
(predicted)

Transmembrane regions
(predicted)

RNASEK-C17orf49-004 ENSP00000450085
ENST00000547302
F8W1H0
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