COA7

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:7.9 FPKM
GTEx:3.1 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA028154

 

Antibody HPA029926

 

Endothelial cells

High   Low  

Glandular cells

Low   High  

Peripheral nerve/ganglion

Low   Medium  
   
   

COLON - HPA RNA-seq

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Average FPKM

7.9

overview Male, age 54
Sample 1
FPKM: 5.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 7.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 12.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 7.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 8.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 6.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 7.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

3.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 2.6
Samples: 149

Max RPKM: 7.2
Min RPKM: 0.8
Std RPKM: 1.1
Median RPKM: 2.5
GTEX-11TT1-0926-SM-5GU5M 7.2
GTEX-11I78-1326-SM-5PNY9 5.3
GTEX-11EM3-1626-SM-5N9CO 5.3
GTEX-YJ8A-1726-SM-5P9IQ 5.2
GTEX-12WSJ-1426-SM-5GCON 4.9
GTEX-ZY6K-1326-SM-5GZWP 4.8
GTEX-13D11-0626-SM-5LZYY 4.6
GTEX-14BMU-1326-SM-5RQIH 4.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 3.6
Samples: 196

Max RPKM: 8.4
Min RPKM: 1.2
Std RPKM: 1.1
Median RPKM: 3.5
GTEX-11EM3-1526-SM-5A5KN 8.4
GTEX-111CU-1426-SM-5GZYP 7.2
GTEX-R53T-1326-SM-48FCQ 6.7
GTEX-11TT1-1026-SM-5PNW7 6.5
GTEX-1339X-1626-SM-5IJDN 6.4
GTEX-144GN-1126-SM-5LU33 6.3
GTEX-131XG-1826-SM-5LZV4 6.2
GTEX-14E6E-1526-SM-5RQIG 6.1
Show all