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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:50.0 nTPM
HPA:50.0 nTPM
GTEx:46.9 nTPM
FANTOM5:118.3 Scaled Tags Per Million
Pig:28.6 nTPM
Mouse:50.8 nTPM
Allen mouse:1.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA024470
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 50.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 40.2
2481 Female, age 94, left hemisphere 53.1
1854 Male, age 80, left hemisphere 41.9
2290 Female, age 72, unknown 41.3
1857 Female, age 85, left hemisphere 40.3
2289 Male, age 61, right hemisphere 40.1
2288 Male, age 75, left hemisphere 39.3
1781 Male, age 74, unknown 33.1
2846 Female, age 79, unknown 32.4
Claustrum
nTPM: 32.3
2198 Male, age 80, both hemispheres 34.1
2196 Female, age 79, unknown 34.0
2292 Female, age 85, both hemispheres 33.7
2392 Female, age 94, both hemispheres 32.6
2645 Female, age 72, unknown 32.4
2491 Male, age 75, both hemispheres 32.1
1956 Male, age 74, unknown 31.7
2284 Female, age 91, both hemispheres 31.3
2568 Male, age 61, both hemispheres 28.7
Globus pallidus, externus
nTPM: 50.0
1996 Male, age 80, right hemisphere 55.7
2646 Male, age 61, right hemisphere 52.3
2772 Female, age 79, unknown 51.4
2567 Female, age 72, unknown 49.9
2395 Male, age 75, both hemispheres 40.8
Globus pallidus, internus
nTPM: 48.5
2483 Female, age 94, right hemisphere 55.2
2037 Male, age 80, right hemisphere 51.3
1818 Male, age 74, unknown 49.5
2287 Male, age 75, right hemisphere 46.7
2778 Female, age 91, both hemispheres 46.0
2111 Female, age 85, right hemisphere 45.6
2566 Female, age 72, unknown 44.8
Nucleus accumbens
nTPM: 37.0
2286 Male, age 75, left hemisphere 43.1
2732 Male, age 80, right hemisphere 41.9
2391 Female, age 94, left hemisphere 39.0
1806 Female, age 85, left hemisphere 37.2
2698 Female, age 72, unknown 35.4
2824 Male, age 61, right hemisphere 34.7
1783 Male, age 74, unknown 34.4
1856 Female, age 91, right hemisphere 30.6
Nucleus basalis of Meynert
nTPM: 40.6
2569 Male, age 61, both hemispheres 53.2
2484 Female, age 94, left hemisphere 37.2
2393 Male, age 80, right hemisphere 36.9
2821 Male, age 75, both hemispheres 35.1
Nucleus of the diagonal band
nTPM: 31.0
1979 Male, age 74, unknown 33.7
2775 Male, age 80, right hemisphere 31.7
1812 Female, age 91, both hemispheres 31.6
2195 Female, age 85, both hemispheres 30.6
2029 Male, age 61, right hemisphere 27.4
Olfactory tubercle
nTPM: 32.3
1846 Male, age 80, right hemisphere 37.4
2856 Male, age 75, right hemisphere 33.5
1998 Female, age 91, both hemispheres 29.4
2487 Female, age 94, left hemisphere 28.8
Putamen
nTPM: 36.4
2482 Female, age 94, left hemisphere 41.8
2489 Female, age 72, unknown 38.1
1829 Male, age 74, unknown 36.8
1838 Male, age 80, right hemisphere 36.1
2647 Male, age 75, left hemisphere 35.0
2466 Female, age 79, unknown 33.7
1937 Female, age 91, right hemisphere 33.2
Septal nuclei
nTPM: 33.3
2199 Male, age 80, right hemisphere 39.3
2059 Female, age 85, both hemispheres 38.4
2394 Male, age 61, left hemisphere 36.2
2009 Female, age 91, both hemispheres 31.3
2629 Female, age 94, right hemisphere 31.3
2031 Female, age 72, unknown 29.6
1960 Male, age 74, unknown 27.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 46.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 46.9
Samples: 246

Max nTPM: 99.3
Min nTPM: 19.9
Std nTPM: 12.9
Median nTPM: 44.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 99.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 93.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 89.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 81.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 80.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 80.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 79.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 79.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 78.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 78.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 74.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 72.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 71.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 71.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 71.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 69.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 67.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 67.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 66.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 66.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 66.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 64.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 64.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 64.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 64.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 63.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 62.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 62.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 62.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 62.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 62.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 61.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 61.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 61.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 60.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 60.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 60.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 60.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 59.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 59.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 58.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 58.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 58.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 56.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 56.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 56.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 56.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 56.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 56.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 56.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 56.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 55.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 55.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 55.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 55.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 54.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 54.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 54.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 54.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 54.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 53.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 53.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 53.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 53.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 53.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 53.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 53.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 53.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 53.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 52.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 52.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 51.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 51.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 50.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 50.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 50.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 50.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 50.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 50.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 50.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 50.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 50.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 49.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 49.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 49.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 49.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 49.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 49.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 49.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 49.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 49.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 48.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 48.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 48.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 48.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 48.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 48.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 47.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 47.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 47.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 47.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 47.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 47.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 47.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 47.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 47.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 46.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 46.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 46.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 46.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 45.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 45.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 45.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 45.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 45.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 45.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 45.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 45.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 45.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 45.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 45.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 44.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 44.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 44.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 44.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 44.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 44.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 44.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 44.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 44.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 44.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 44.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 43.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 43.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 43.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 43.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 43.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 43.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 43.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 43.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 42.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 42.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 42.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 42.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 42.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 42.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 41.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 41.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 41.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 41.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 41.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 41.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 41.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 40.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 40.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 40.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 40.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 40.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 40.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 40.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 40.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 40.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 40.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 39.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 39.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 39.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 39.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 39.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 39.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 39.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 39.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 38.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 38.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 38.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 37.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 37.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 37.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 37.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 37.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 37.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 37.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 37.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 37.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 37.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 37.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 37.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 37.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 37.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 37.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 37.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 36.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 36.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 36.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 36.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 36.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 36.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 36.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 36.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 36.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 36.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 36.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 35.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 35.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 35.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 35.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 34.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 34.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 34.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 34.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 34.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 34.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 34.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 34.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 34.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 34.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 34.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 34.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 33.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 33.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 33.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 33.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 33.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 32.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 32.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 32.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 32.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 32.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 31.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 31.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 31.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 31.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 31.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 31.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 31.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 30.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 30.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 30.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 29.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 29.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 28.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 27.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 27.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 27.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 26.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 23.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 19.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 38.4
Samples: 246

Max nTPM: 117.8
Min nTPM: 13.3
Std nTPM: 13.1
Median nTPM: 35.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 117.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 96.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 93.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 80.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 79.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 78.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 70.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 67.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 65.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 64.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 63.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 62.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 62.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 62.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 61.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 60.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 59.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 58.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 55.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 54.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 54.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 54.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 53.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 53.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 53.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 52.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 52.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 51.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 51.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 51.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 50.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 50.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 49.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 49.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 49.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 49.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 48.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 48.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 48.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 48.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 48.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 47.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 47.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 46.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 46.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 46.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 45.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 45.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 44.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 44.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 44.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 44.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 44.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 44.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 44.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 44.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 44.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 44.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 44.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 44.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 43.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 43.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 43.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 43.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 43.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 43.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 42.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 42.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 42.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 42.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 42.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 41.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 41.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 41.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 41.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 41.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 41.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 40.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 40.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 40.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 40.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 40.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 40.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 40.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 39.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 39.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 39.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 39.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 39.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 38.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 38.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 38.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 38.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 38.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 38.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 38.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 38.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 38.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 38.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 38.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 38.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 38.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 38.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 37.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 37.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 37.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 37.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 37.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 37.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 37.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 37.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 36.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 36.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 36.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 36.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 36.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 36.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 36.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 36.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 36.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 36.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 35.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 35.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 35.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 35.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 34.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 34.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 34.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 34.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 34.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 34.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 34.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 34.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 34.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 34.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 34.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 34.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 34.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 34.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 34.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 33.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 33.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 33.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 33.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 33.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 33.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 33.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 33.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 33.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 33.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 33.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 33.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 33.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 32.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 32.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 32.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 32.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 32.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 32.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 32.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 32.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 32.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 32.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 32.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 32.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 32.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 32.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 32.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 32.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 32.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 32.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 32.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 32.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 31.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 31.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 31.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 31.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 31.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 31.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 31.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 31.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 31.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 31.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 31.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 30.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 30.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 30.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 29.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 29.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 29.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 29.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 29.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 29.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 29.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 29.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 29.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 29.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 28.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 28.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 28.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 28.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 28.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 28.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 28.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 28.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 28.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 28.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 27.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 27.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 27.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 27.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 27.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 27.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 27.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 27.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 26.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 26.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 26.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 26.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 26.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 26.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 25.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 25.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 25.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 25.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 25.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 25.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 24.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 24.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 24.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 24.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 24.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 24.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 23.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 23.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 22.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 22.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 22.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 21.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 21.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 20.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 19.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 19.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 18.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 18.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 13.3
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Brain - Putamen (basal ganglia)
Average nTPM: 42.4
Samples: 205

Max nTPM: 96.1
Min nTPM: 17.8
Std nTPM: 12.1
Median nTPM: 40.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 96.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 95.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 77.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 76.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 70.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 69.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 68.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 66.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 66.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 66.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 66.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 63.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 61.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 60.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 60.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 59.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 59.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 59.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 58.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 57.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 56.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 55.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 55.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 55.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 54.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 54.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 54.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 54.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 53.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 53.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 53.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 53.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 53.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 53.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 52.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 51.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 51.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 50.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 50.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 50.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 50.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 50.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 50.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 50.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 49.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 49.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 49.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 49.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 49.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 49.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 49.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 48.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 47.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 47.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 47.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 47.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 47.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 47.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 47.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 47.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 46.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 46.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 46.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 46.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 46.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 46.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 46.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 46.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 46.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 46.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 46.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 46.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 45.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 45.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 45.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 45.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 45.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 44.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 44.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 44.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 44.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 43.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 43.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 43.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 43.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 43.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 43.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 43.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 43.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 42.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 42.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 42.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 42.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 42.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 41.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 41.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 41.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 41.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 41.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 41.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 41.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 41.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 40.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 40.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 40.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 40.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 40.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 40.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 40.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 40.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 40.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 39.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 39.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 39.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 39.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 38.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 38.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 38.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 38.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 38.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 38.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 38.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 38.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 38.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 37.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 37.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 37.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 37.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 37.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 37.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 37.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 37.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 37.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 37.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 36.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 36.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 36.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 36.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 35.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 35.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 35.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 35.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 35.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 35.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 34.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 34.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 34.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 34.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 34.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 34.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 34.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 33.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 33.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 33.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 33.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 33.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 33.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 33.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 33.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 33.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 33.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 33.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 33.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 32.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 32.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 32.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 32.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 31.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 31.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 31.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 31.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 31.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 30.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 30.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 30.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 30.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 30.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 30.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 30.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 30.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 30.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 30.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 30.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 28.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 28.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 28.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 28.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 27.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 27.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 27.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 27.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 26.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 26.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 26.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 26.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 26.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 26.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 25.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 24.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 24.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 23.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 23.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 22.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 22.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 17.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 118.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 103.5
FF:10164-103B2 76 years, female 103.5
Globus pallidus
Scaled Tags Per Million: 118.3
FF:10161-103A8 76 years, female 124.6
FF:10175-103C4 60 years, female 112.0
Nucleus accumbens
Scaled Tags Per Million: 67.8
FF:10037-101F1 23-56 years, mixed 67.8
Putamen
Scaled Tags Per Million: 74.4
FF:10176-103C5 60 years, female 74.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 28.6
Pig sample Sample description nTPM
Caudate
nTPM: 16.1
Samples: 4

Max nTPM: 17.6
Min nTPM: 15.1
Sample A Female 15.1
Sample B Female 15.3
Sample C Male 17.6
Sample D Male 16.5
Putamen
nTPM: 28.6
Samples: 4

Max nTPM: 44.5
Min nTPM: 16.2
Sample A Female 44.5
Sample B Female 16.2
Sample C Male 24.8
Sample D Male 29.0
Septum
nTPM: 25.1
Samples: 4

Max nTPM: 31.2
Min nTPM: 18.4
Sample A Female 23.6
Sample B Female 18.4
Sample C Male 31.2
Sample D Male 27.2
Ventral pallidum
nTPM: 27.9
Samples: 4

Max nTPM: 41.5
Min nTPM: 14.6
Sample A Female 14.6
Sample B Female 23.3
Sample C Male 41.5
Sample D Male 32.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 50.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 50.8
Samples: 4

Max nTPM: 53.1
Min nTPM: 48.3
Sample A Male 48.3
Sample B Male 50.5
Sample C Female 53.1
Sample D Female 51.2
Septum
nTPM: 39.8
Samples: 4

Max nTPM: 43.0
Min nTPM: 35.5
Sample A Male 39.8
Sample B Male 35.5
Sample C Female 40.7
Sample D Female 43.0
Ventral forebrain
nTPM: 45.3
Samples: 4

Max nTPM: 47.7
Min nTPM: 43.9
Sample A Male 44.0
Sample B Male 47.7
Sample C Female 43.9
Sample D Female 45.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.6
77798987 Antisense, RP_070212_03_A11, Mouse strain C57BL/6J (56 days, male) 0.7
73817430 Antisense, RP_051101_01_A05, Mouse strain C57BL/6J (56 days, male) 0.7
69540345 Antisense, RP_050426_01_E10, Mouse strain C57BL/6J (56 days, male) 0.2
Pallidum
Expression energy: 1.2
73817430 Antisense, RP_051101_01_A05, Mouse strain C57BL/6J (56 days, male) 1.5
77798987 Antisense, RP_070212_03_A11, Mouse strain C57BL/6J (56 days, male) 1.4
69540345 Antisense, RP_050426_01_E10, Mouse strain C57BL/6J (56 days, male) 0.6

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