BAP1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:19.9 FPKM
GTEx:24.5 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA028814

 

Antibody CAB004322

 

Endothelial cells

Medium   Not detected  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Low   Not detected  
   
   

COLON - HPA RNA-seq

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Average FPKM

19.9

overview Male, age 54
Sample 1
FPKM: 16.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 22.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 21.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 16.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 19.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 19.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 23.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

24.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 24.1
Samples: 149

Max RPKM: 36.6
Min RPKM: 16.3
Std RPKM: 3.8
Median RPKM: 23.9
GTEX-13O1R-2426-SM-5KLZZ 36.6
GTEX-14E6C-2226-SM-5QGQG 34.5
GTEX-13PL7-2426-SM-5J2N3 33.8
GTEX-Y9LG-1326-SM-4VBQB 33.0
GTEX-14A5H-1626-SM-5SIAN 33.0
GTEX-11TUW-2326-SM-5EQMO 32.6
GTEX-13OW6-2226-SM-5N9FL 32.1
GTEX-13PVQ-2726-SM-5L3H7 31.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 24.9
Samples: 196

Max RPKM: 36.2
Min RPKM: 7.4
Std RPKM: 3.2
Median RPKM: 24.9
GTEX-11TUW-2026-SM-5EQL8 36.2
GTEX-X5EB-0926-SM-46MVT 32.4
GTEX-WQUQ-2526-SM-4MVNO 31.8
GTEX-1128S-1626-SM-5H12O 31.1
GTEX-XBED-1526-SM-4AT5W 30.8
GTEX-XUJ4-2026-SM-4BOOW 30.6
GTEX-11WQK-2126-SM-5EQME 30.5
GTEX-UJMC-1326-SM-4IHLS 30.4
Show all