CCDC171

GENERAL INFORMATION

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Gene name

CCDC171

Gene description

Coiled-coil domain containing 171

Protein class

Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

4
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HUMAN PROTEIN ATLAS INFORMATION

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RNA tissue category

HPA:Tissue enhanced (testis)
GTEx:Tissue enhanced (testis)

Protein evidence

Evidence at protein level

Protein localization

Cytoplasmic expression in various cell types.

ANTIBODY RELIABILITY

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Data reliability
description

Pending RNA-based expert annotation.

Data reliability

Uncertain based on 3 antibodies.
HPA019803 , HPA019806 , HPA024133
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RNA AND PROTEIN EXPRESSION SUMMARY

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RNA expression (FPKM) Protein expression (score)
Brain
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Adipose & soft tissue
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis



PROTEIN EXPRESSION OVERVIEW

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Organ

Expression



RNA EXPRESSION OVERVIEW

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HPA dataset
RNA tissue category:  Tissue enhanced (testis)

Organ

Expression

GTEx dataset
RNA tissue category:  Tissue enhanced (testis)

Organ

Expression



GENE INFORMATION

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Gene name

CCDC171 (HGNC Symbol)

Synonyms

bA536D16.1, bA778P13.1, C9orf93, Em:AL513423.1, FLJ39267, FLJ46740

Description

Coiled-coil domain containing 171 (HGNC Symbol)

Entrez gene summary

Chromosome

9

Cytoband

p22.3

Chromosome location (bp)

15552897 - 16061663

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000164989 (version 78.38)

Entrez gene

203238

UniProt

Q6TFL3 (UniProt - Evidence at transcript level)

neXtProt

NX_Q6TFL3

Antibodypedia

CCDC171 antibodies


PROTEIN BROWSER

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ENST00000380701
 
ENST00000432954
 
ENST00000449575
 
ENST00000535968
 
 
 
 


PROTEIN INFORMATION

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Splice variant

Ensembl

UniProt

Protein class

Gene ontology

Length
(aa)

Molecular mass
(kDa)

Signal peptide
(predicted)

Transmembrane regions
(predicted)

CCDC171-001 ENSP00000370077
ENST00000380701
Q6TFL3
Show all »
Show » Show » 1326 152.8 No 0
CCDC171-003 ENSP00000409055
ENST00000449575
Show » 469 53.1 No 0
CCDC171-008 ENSP00000399526
ENST00000432954
Show » 257 29.5 No 0
CCDC171-201 ENSP00000438838
ENST00000535968
Q7Z3F8
Show all »
Show » 317 37.7 No 0