C18orf54

GENERAL INFORMATION

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Gene name

C18orf54

Gene description

Chromosome 18 open reading frame 54

Protein class

Predicted intracellular proteins
Predicted secreted proteins

Predicted localization

Intracellular,Secreted

Number of transcripts

4
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HUMAN PROTEIN ATLAS INFORMATION

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RNA tissue category

HPA:Tissue enriched (testis)
GTEx:Tissue enriched (testis)

Protein evidence

Evidence at protein level

Protein localization

RNA data mainly suggests expression in testis. RNA-based expert annotation could not be performed.

ANTIBODY RELIABILITY

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Data reliability
description

Secreted protein, tissue location of RNA and protein might differ and correlation is complex. Presumed off target binding observed and disregarded. Pending external verification.

Data reliability

Uncertain based on 2 antibodies.
HPA040704 , HPA041098
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RNA AND PROTEIN EXPRESSION SUMMARY

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RNA expression (FPKM) Protein expression (score)
Brain
N/A
Endocrine tissues
N/A
Bone marrow & immune system
N/A
Muscle tissues
N/A
Lung
N/A
Nasopharynx
N/A
N/A
Bronchus
N/A
N/A
Lung
N/A
Liver & gallbladder
N/A
Liver
N/A
Pancreas
N/A
Pancreas
N/A
Gastrointestinal tract
N/A
Kidney & urinary bladder
N/A
Male tissues
N/A
Testis
N/A
Epididymis
N/A
N/A
Prostate
N/A
Seminal vesicle
N/A
N/A
Female tissues
N/A
Breast
N/A
N/A
Vagina
N/A
N/A
Cervix, uterine
N/A
N/A
Ovary
N/A
Placenta
N/A
Adipose & soft tissue
N/A
Skin
N/A
Skin
N/A
Cerebral cortex

Thyroid gland

Lymph node

Liver

Colon

Kidney

Testis



PROTEIN EXPRESSION OVERVIEW

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RNA-based expert annotation could not be performed, due to inconclusive results. View immunohistochemistry primary data.


RNA EXPRESSION OVERVIEW

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HPA dataset
RNA tissue category:  Tissue enriched (testis)

Organ

Expression

GTEx dataset
RNA tissue category:  Tissue enriched (testis)

Organ

Expression



GENE INFORMATION

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Gene name

C18orf54 (HGNC Symbol)

Synonyms

LAS2, MGC33382

Description

Chromosome 18 open reading frame 54 (HGNC Symbol)

Entrez gene summary

Chromosome

18

Cytoband

q21.2

Chromosome location (bp)

54357917 - 54385218

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000166845 (version 78.38)

Entrez gene

162681

UniProt

Q8IYD9 (UniProt - Evidence at transcript level)

neXtProt

NX_Q8IYD9

Antibodypedia

C18orf54 antibodies


PROTEIN BROWSER

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ENST00000300091
 
ENST00000382911
 
ENST00000578138
 
ENST00000620105
 
 
 
 


PROTEIN INFORMATION

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Splice variant

Ensembl

UniProt

Protein class

Gene ontology

Length
(aa)

Molecular mass
(kDa)

Signal peptide
(predicted)

Transmembrane regions
(predicted)

C18orf54-001 ENSP00000300091
ENST00000300091
Q8IYD9
Show all »
Show » Show » 372 41.8 Yes 0
C18orf54-002 ENSP00000372368
ENST00000382911
Q8IYD9
Show all »
Show » Show » 533 60.3 Yes 0
C18orf54-005 ENSP00000462317
ENST00000578138
J3KS56
Show all »
Show » 151 17.1 No 0
C18orf54-201 ENSP00000477654
ENST00000620105
Q8IYD9
Show all »
Show » Show » 533 60.3 Yes 0