ASMTL

SOFT TISSUE - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:10.4 FPKM
GTEx:12.1 RPKM

SOFT TISSUE 1 - Immunohistochemistry

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Annotated protein
expression

Adipocytes:Medium
Chondrocytes:Not detected
Fibroblasts:Medium
Peripheral nerve:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA003630

 

Antibody HPA021865

 

Adipocytes

Not detected   Medium  

Chondrocytes

Not available   Not detected  

Fibroblasts

Medium   Medium  

Peripheral nerve

Medium   Not detected  
   
   
   

SOFT TISSUE 2 - Immunohistochemistry

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Annotated protein
expression

Adipocytes:Medium
Chondrocytes:Not available
Fibroblasts:Medium
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA003630

 

Antibody HPA021865

 

Adipocytes

Not detected   Medium  

Chondrocytes

Not available   Not available  

Fibroblasts

Low   Medium  

Peripheral nerve

Medium   Medium  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

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Average FPKM

10.4

N/A Female, age 80
Sample 1
FPKM: 14.6
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
FPKM: 8.5
N/A Female, age 57
Sample 3
FPKM: 8.9
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
FPKM: 10.9
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
FPKM: 8.9
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

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Average RPKM

12.1

GTEx sample id

RPKM

 

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 13.4
Samples: 350

Max RPKM: 21.6
Min RPKM: 4.1
Std RPKM: 2.5
Median RPKM: 13.3
GTEX-131XE-2426-SM-5EQ5V 21.6
GTEX-146FQ-0226-SM-5NQAL 21.5
GTEX-Y8E4-0726-SM-4WWFN 20.2
GTEX-13G51-2626-SM-5LZYW 19.9
GTEX-13111-1726-SM-5EGJZ 19.7
GTEX-13N11-2626-SM-5K7UQ 19.2
GTEX-13QJ3-0426-SM-5RQHP 19.2
GTEX-OOBJ-0226-SM-2YUMM 19.1
Show all
 

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 10.9
Samples: 227

Max RPKM: 17.8
Min RPKM: 2.9
Std RPKM: 2.3
Median RPKM: 10.8
GTEX-1212Z-0526-SM-5FQSQ 17.8
GTEX-XLM4-1026-SM-4AT51 17.2
GTEX-Y8E4-1226-SM-5IFIM 16.9
GTEX-13O3P-0926-SM-5IFFI 16.5
GTEX-14DAQ-2526-SM-5RQIO 16.1
GTEX-XUZC-1126-SM-4BOPZ 16.1
GTEX-ZUA1-2126-SM-57YRB 16.0
GTEX-131YS-1726-SM-5HL7G 15.7
Show all