ASMTL

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:11.4 FPKM
GTEx:12.5 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:High
Keratinocytes:High
Langerhans:Medium
Melanocytes:High
 

Antibody staining

Antibody HPA003630

 

Antibody HPA021865

 

Fibroblasts

Medium   High  

Keratinocytes

Not detected   High  

Langerhans

Medium   Medium  

Melanocytes

Low   High  
   
   
   

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:Low
 
 
 

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA003630

 

Antibody HPA021865

 

Epidermal cells

Not detected   Medium  
      
      
      
   
   
   

SKIN - HPA RNA-seq

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Average FPKM

11.4

overview Female, age 34
Sample 1
FPKM: 12.9
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 5.6
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 15.7

SKIN - GTEx RNA-seq

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Average RPKM

12.5

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 12.0
Samples: 250

Max RPKM: 22.1
Min RPKM: 5.2
Std RPKM: 2.2
Median RPKM: 11.9
GTEX-146FQ-2126-SM-5RQHU 22.1
GTEX-11WQC-1826-SM-5GU59 18.9
GTEX-ZVTK-0226-SM-51MRG 18.4
GTEX-Y3IK-1626-SM-4YCF5 18.1
GTEX-1497J-0226-SM-5QGPU 18.0
GTEX-131XE-1626-SM-5K7VO 17.8
GTEX-131XH-0126-SM-5LZUY 17.1
GTEX-12126-0826-SM-5FQTZ 16.7
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 12.9
Samples: 357

Max RPKM: 25.5
Min RPKM: 7.3
Std RPKM: 2.1
Median RPKM: 12.7
GTEX-146FQ-0126-SM-5NQA9 25.5
GTEX-Y114-2426-SM-4TT8A 19.5
GTEX-1211K-2026-SM-5EQ4Z 19.2
GTEX-Q2AI-1326-SM-2S1PL 18.5
GTEX-12126-0326-SM-5PNW3 18.5
GTEX-Y3IK-2426-SM-4WWDU 18.2
GTEX-13N11-2526-SM-5K7UE 17.9
GTEX-NPJ8-0126-SM-2YUNR 17.8
Show all