CNBP

GENERAL INFORMATION

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Gene name

CNBP

Gene description

CCHC-type zinc finger, nucleic acid binding protein

Protein class

Cancer-related genes
Disease related genes
Plasma proteins
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

8
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HUMAN PROTEIN ATLAS INFORMATION

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RNA tissue category

HPA:Expressed in all
GTEx:Expressed in all

Protein evidence

Evidence at protein level

ANTIBODY RELIABILITY

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Data reliability

Pending normal tissue annotation.
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RNA AND PROTEIN EXPRESSION SUMMARY

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RNA expression (FPKM) Protein expression (score)
Brain
N/A
Endocrine tissues
N/A
Bone marrow & immune system
N/A
Muscle tissues
N/A
Lung
N/A
Nasopharynx
N/A
N/A
Bronchus
N/A
N/A
Lung
N/A
Liver & gallbladder
N/A
Liver
N/A
Pancreas
N/A
Pancreas
N/A
Gastrointestinal tract
N/A
Kidney & urinary bladder
N/A
Male tissues
N/A
Testis
N/A
Epididymis
N/A
N/A
Prostate
N/A
Seminal vesicle
N/A
N/A
Female tissues
N/A
Breast
N/A
N/A
Vagina
N/A
N/A
Cervix, uterine
N/A
N/A
Ovary
N/A
Placenta
N/A
Adipose & soft tissue
N/A
Skin
N/A
Skin
N/A


PROTEIN EXPRESSION OVERVIEW

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Pending normal tissue annotation.


RNA EXPRESSION OVERVIEW

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HPA dataset
RNA tissue category:  Expressed in all

Organ

Expression

GTEx dataset
RNA tissue category:  Expressed in all

Organ

Expression



GENE INFORMATION

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Gene name

CNBP (HGNC Symbol)

Synonyms

CNBP1, DM2, RNF163, ZCCHC22, ZNF9

Description

CCHC-type zinc finger, nucleic acid binding protein (HGNC Symbol)

Entrez gene summary

This gene encodes a nucleic-acid binding protein with seven zinc-finger domains. The protein has a preference for binding single stranded DNA and RNA. The protein functions in cap-independent translation of ornithine decarboxylase mRNA, and may also function in sterol-mediated transcriptional regulation. A CCTG expansion in the first intron of this gene results in myotonic dystrophy type 2. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

Chromosome

3

Cytoband

q21.3

Chromosome location (bp)

129169484 - 129183922

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000169714 (version 78.38)

Entrez gene

7555

UniProt

P62633 (UniProt - Evidence at protein level)

neXtProt

NX_P62633

Antibodypedia

CNBP antibodies


PROTEIN BROWSER

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ENST00000422453
 
ENST00000441626
 
ENST00000446936
 
ENST00000451728
 
ENST00000500450
 
ENST00000502976
 
ENST00000504813
 
ENST00000512338
 
 
 
 


PROTEIN INFORMATION

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Splice variant

Ensembl

UniProt

Protein class

Gene ontology

Length
(aa)

Molecular mass
(kDa)

Signal peptide
(predicted)

Transmembrane regions
(predicted)

CNBP-001 ENSP00000410619
ENST00000422453
P62633
Show all »
Show » Show » 177 19.5 No 0
CNBP-002 ENSP00000421323
ENST00000502976
P62633
Show all »
Show » Show » 170 18.7 No 0
CNBP-003 ENSP00000422110
ENST00000504813
P62633
Show all »
Show » Show » 167 18.4 No 0
CNBP-004 ENSP00000426223
ENST00000500450
P62633
Show all »
Show » Show » 160 17.7 No 0
CNBP-008 ENSP00000424787
ENST00000512338
D6RAT4
Show all »
Show » Show » 114 12.3 No 0
CNBP-009 ENSP00000410769
ENST00000441626
P62633
Show all »
Show » Show » 179 19.7 No 0
CNBP-010 ENSP00000399488
ENST00000451728
P62633
Show all »
Show » Show » 178 19.6 No 0
CNBP-011 ENSP00000400444
ENST00000446936
P62633
Show all »
Show » Show » 172 19 No 0