AFF1

COLON - Expression summary

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RNA expression

HPA:15.6 FPKM
GTEx:17.1 RPKM

COLON - Immunohistochemistry

Pending normal tissue analysis


COLON - HPA RNA-seq

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Average FPKM

15.6

overview Male, age 54
Sample 1
FPKM: 15.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 19.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 17.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 13.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 13.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 11.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 16.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

17.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 18.6
Samples: 149

Max RPKM: 30.4
Min RPKM: 6.5
Std RPKM: 4.2
Median RPKM: 17.8
GTEX-139T6-1426-SM-5P9J7 30.4
GTEX-111YS-1826-SM-5GIEP 30.1
GTEX-13111-1926-SM-5GCOL 28.7
GTEX-Y114-1626-SM-4TT7I 28.3
GTEX-145ME-1126-SM-5SIAT 27.9
GTEX-13VXT-2026-SM-5L3EW 27.9
GTEX-ZXES-1726-SM-5E43G 27.7
GTEX-11WQK-2526-SM-5CVL8 27.1
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 15.7
Samples: 196

Max RPKM: 32.5
Min RPKM: 6.4
Std RPKM: 4.5
Median RPKM: 14.8
GTEX-111YS-1626-SM-5GZZ9 32.5
GTEX-ZV6S-1226-SM-59HLH 31.4
GTEX-11P81-1126-SM-5GU5G 27.6
GTEX-14ICL-1226-SM-5S2RD 26.8
GTEX-Y114-1526-SM-4TT79 26.4
GTEX-S341-1426-SM-4AD6U 26.4
GTEX-13OVG-1426-SM-5K7VP 25.9
GTEX-T6MO-0826-SM-4DM51 24.9
Show all