BGN

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:21.1 FPKM
GTEx:42.1 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA003157

 

Antibody CAB003678

 

Endothelial cells

Not detected   Not detected  

Glandular cells

Not detected   Not detected  

Peripheral nerve/ganglion

Not available   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

21.1

overview Male, age 54
Sample 1
FPKM: 16.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 8.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 5.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 33.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 36.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 31.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 14.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

42.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 49.7
Samples: 149

Max RPKM: 256.6
Min RPKM: 7.6
Std RPKM: 38.3
Median RPKM: 38.2
GTEX-13X6I-2726-SM-5Q5ET 256.6
GTEX-ZVT4-2626-SM-5N9GJ 181.9
GTEX-13FHO-2726-SM-5K7VG 145.9
GTEX-139TS-2226-SM-5J2N1 138.7
GTEX-147JS-2626-SM-5S2UX 129.2
GTEX-ZAB4-2426-SM-5HL8A 127.6
GTEX-ZDTS-2726-SM-5L3E2 125.4
GTEX-13OVJ-1826-SM-5KM2D 124.1
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 34.5
Samples: 196

Max RPKM: 362
Min RPKM: 3.6
Std RPKM: 42
Median RPKM: 17.4
GTEX-13OVG-1426-SM-5K7VP 362.0
GTEX-13W3W-2126-SM-5K7UX 185.5
GTEX-QDVN-1326-SM-48TZ3 177.1
GTEX-145ME-0826-SM-5O9AF 136.9
GTEX-ZAB4-2226-SM-5HL97 131.5
GTEX-144GN-1126-SM-5LU33 128.6
GTEX-12ZZZ-2426-SM-5GCNN 121.8
GTEX-13O3P-2326-SM-5KM55 121.1
Show all