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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
2287.7
nTPM
Monaco:
681.7
nTPM
Schmiedel:
795.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
2287.7
HPA sample
nTPM
gdT-cell nTPM: 1158.6
Samples: 6
Max nTPM: 1391.3
Min nTPM: 898.4
P10809_1007
1391.3
P10809_1022
1035.3
P10809_1041
1282.0
P10809_1060
898.4
P10809_1077
1166.0
P10809_1098
1178.5
MAIT T-cell nTPM: 1834.5
Samples: 6
Max nTPM: 2088.9
Min nTPM: 1503.7
P10809_1006
1683.5
P10809_1024
1931.1
P10809_1043
1963.0
P10809_1062
1836.5
P10809_1083
1503.7
P10809_1097
2088.9
Memory CD4 T-cell nTPM: 1961.1
Samples: 6
Max nTPM: 2333.8
Min nTPM: 1500.5
P10809_1014
2050.1
P10809_1026
2333.8
P10809_1045
2228.3
P10809_1064
1588.0
P10809_1086
1500.5
P10809_1113
2065.8
Memory CD8 T-cell nTPM: 1478.1
Samples: 5
Max nTPM: 1618.4
Min nTPM: 1211.0
P10809_1012
1602.2
P10809_1027
1455.1
P10809_1046
1618.4
P10809_1065
1211.0
P10809_1111
1503.8
Naive CD4 T-cell nTPM: 2287.7
Samples: 6
Max nTPM: 2651.5
Min nTPM: 1692.5
P10809_1015
2301.3
P10809_1030
2651.5
P10809_1049
2446.8
P10809_1068
2367.0
P10809_1085
1692.5
P10809_1112
2267.2
Naive CD8 T-cell nTPM: 1993.4
Samples: 6
Max nTPM: 2851.6
Min nTPM: 1274.4
P10809_1016
2851.6
P10809_1031
2239.7
P10809_1050
1915.0
P10809_1069
1649.8
P10809_1087
1274.4
P10809_1110
2029.9
T-reg nTPM: 1713.5
Samples: 6
Max nTPM: 1892.2
Min nTPM: 1430.6
P10809_1018
1430.6
P10809_1037
1892.2
P10809_1056
1727.2
P10809_1075
1795.7
P10809_1094
1696.7
P10809_1106
1738.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
681.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 488.4
Samples: 4
Max nTPM: 727.8
Min nTPM: 176.6
RHH5202_R3573
176.6
RHH5230_R3602
663.2
RHH5259_R3631
727.8
RHH5288_R3660
385.8
Effector memory CD8 T-cell nTPM: 198.4
Samples: 4
Max nTPM: 336.8
Min nTPM: 125.8
RHH5203_R3574
182.0
RHH5231_R3603
149.1
RHH5260_R3632
336.8
RHH5289_R3661
125.8
MAIT T-cell nTPM: 413.3
Samples: 4
Max nTPM: 496.8
Min nTPM: 235.5
RHH5233_R3605
235.5
RHH5205_R3576
484.9
RHH5262_R3634
496.8
RHH5297_R3663
435.8
Memory CD4 T-cell TFH nTPM: 353.4
Samples: 4
Max nTPM: 463.2
Min nTPM: 259.9
RHH5300_R3666
463.2
RHH5236_R3608
352.4
RHH5265_R3637
338.1
RHH5208_R3579
259.9
Memory CD4 T-cell Th1 nTPM: 640.2
Samples: 4
Max nTPM: 1048.4
Min nTPM: 222.2
RHH5210_R3581
222.2
RHH5302_R3668
659.9
RHH5238_R3610
1048.4
RHH5267_R3639
630.4
Memory CD4 T-cell Th1/Th17 nTPM: 515.0
Samples: 4
Max nTPM: 726.7
Min nTPM: 274.8
RHH5303_R3669
347.9
RHH5211_R3582
274.8
RHH5239_R3611
710.7
RHH5268_R3640
726.7
Memory CD4 T-cell Th17 nTPM: 483.6
Samples: 4
Max nTPM: 686.4
Min nTPM: 297.4
RHH5304_R3670
686.4
RHH5212_R3583
297.4
RHH5240_R3612
479.4
RHH5269_R3641
471.1
Memory CD4 T-cell Th2 nTPM: 578.2
Samples: 4
Max nTPM: 908.8
Min nTPM: 376.4
RHH5305_R3671
908.8
RHH5213_R3584
376.4
RHH5241_R3613
504.4
RHH5270_R3642
523.3
Naive CD4 T-cell nTPM: 681.8
Samples: 4
Max nTPM: 967.2
Min nTPM: 504.7
RHH5306_R3672
967.2
RHH5214_R3585
504.7
RHH5242_R3614
545.1
RHH5271_R3643
710.0
Naive CD8 T-cell nTPM: 647.4
Samples: 4
Max nTPM: 914.3
Min nTPM: 363.7
RHH5201_R3572
363.7
RHH5229_R3601
914.3
RHH5258_R3630
453.5
RHH5287_R3659
858.1
Non-Vd2 gdTCR nTPM: 262.1
Samples: 4
Max nTPM: 401.6
Min nTPM: 158.7
RHH5235_R3607
401.6
RHH5264_R3636
158.7
RHH5207_R3578
236.1
RHH5299_R3665
251.9
T-reg nTPM: 451.1
Samples: 4
Max nTPM: 584.2
Min nTPM: 234.6
RHH5301_R3667
584.2
RHH5237_R3609
234.6
RHH5266_R3638
572.4
RHH5209_R3580
413.3
Terminal effector memory CD4 T-cell nTPM: 289.8
Samples: 2
Max nTPM: 378.0
Min nTPM: 201.5
RHH5243_R3615
378.0
RHH5272_R3644
201.5
Terminal effector memory CD8 T-cell nTPM: 315.8
Samples: 4
Max nTPM: 481.2
Min nTPM: 148.6
RHH5232_R3604
148.6
RHH5204_R3575
481.2
RHH5261_R3633
408.8
RHH5296_R3662
224.7
Vd2 gdTCR nTPM: 517.6
Samples: 4
Max nTPM: 759.4
Min nTPM: 364.0
RHH5234_R3606
364.0
RHH5206_R3577
759.4
RHH5263_R3635
473.1
RHH5298_R3664
473.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.