MTA1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:8.1 FPKM
GTEx:26.1 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA005544

 

Antibody CAB004508

 

Endothelial cells

Medium   Not detected  

Glandular cells

Low   Low  

Peripheral nerve/ganglion

Medium   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

8.1

overview Male, age 54
Sample 1
FPKM: 9.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 8.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 7.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 10.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 8.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 7.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 5.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

26.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 29.0
Samples: 149

Max RPKM: 43.3
Min RPKM: 16.8
Std RPKM: 4.5
Median RPKM: 28.8
GTEX-13PVQ-2726-SM-5L3H7 43.3
GTEX-13O1R-2426-SM-5KLZZ 42.4
GTEX-139TS-2226-SM-5J2N1 41.2
GTEX-145MH-2726-SM-5QGQ6 40.5
GTEX-XUW1-1826-SM-4BOQD 39.0
GTEX-13OW5-2826-SM-5KM1G 38.3
GTEX-ZC5H-2426-SM-4WAZ6 37.1
GTEX-11DXY-2026-SM-5N9CZ 36.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 23.2
Samples: 196

Max RPKM: 37.8
Min RPKM: 8.9
Std RPKM: 4.7
Median RPKM: 22.8
GTEX-13OW5-2626-SM-5MR3M 37.8
GTEX-RWS6-1826-SM-47JXX 35.7
GTEX-11TTK-2426-SM-5PNYO 34.4
GTEX-ZYVF-2826-SM-5GIDK 34.1
GTEX-147JS-2526-SM-5S2Q8 33.4
GTEX-145MO-2426-SM-5NQ9W 33.1
GTEX-V955-1626-SM-4JBHJ 32.8
GTEX-11TUW-2026-SM-5EQL8 32.2
Show all