PRKD1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:1.8 FPKM
GTEx:4.1 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA029834

 

Antibody CAB018367

 

Endothelial cells

Not detected   Low  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Not available   Medium  
   
   

COLON - HPA RNA-seq

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Average FPKM

1.8

overview Male, age 54
Sample 1
FPKM: 1.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 1.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 0.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 1.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 2.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 3.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 1.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

4.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 5.6
Samples: 149

Max RPKM: 13.2
Min RPKM: 1.9
Std RPKM: 2
Median RPKM: 5.1
GTEX-13CF3-1326-SM-5LZXZ 13.2
GTEX-131XG-1526-SM-5GCNQ 12.3
GTEX-11TT1-0926-SM-5GU5M 12.2
GTEX-1122O-1426-SM-5H11R 11.9
GTEX-132AR-2826-SM-5IJFV 11.4
GTEX-1211K-1826-SM-5EGJ2 11.2
GTEX-1339X-1726-SM-5P9J9 10.8
GTEX-11I78-1326-SM-5PNY9 10.1
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 2.6
Samples: 196

Max RPKM: 17.3
Min RPKM: 0.3
Std RPKM: 2.3
Median RPKM: 1.9
GTEX-XAJ8-0426-SM-47JYJ 17.3
GTEX-13CF3-1426-SM-5K7YY 12.7
GTEX-QLQ7-1126-SM-4R1KN 9.2
GTEX-ZYVF-2826-SM-5GIDK 8.1
GTEX-1339X-1626-SM-5IJDN 7.6
GTEX-13FH7-1526-SM-5J2N6 7.5
GTEX-Y114-1526-SM-4TT79 7.3
GTEX-ZYFG-1926-SM-5GID5 7.2
Show all