SHOX

GENERAL INFORMATION

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Gene name

SHOX

Gene description

Short stature homeobox

Protein class

Disease related genes
Predicted intracellular proteins
Transcription factors

Predicted localization

Intracellular

Number of transcripts

4
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HUMAN PROTEIN ATLAS INFORMATION

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RNA tissue category

HPA:Not detected
GTEx:Tissue enhanced (adipose tissue)

Protein evidence

Evidence at protein level

ANTIBODY RELIABILITY

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Data reliability

Pending normal tissue annotation.
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RNA AND PROTEIN EXPRESSION SUMMARY

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RNA expression (FPKM) Protein expression (score)
Brain
N/A
Endocrine tissues
N/A
Bone marrow & immune system
N/A
Muscle tissues
N/A
Lung
N/A
Nasopharynx
N/A
N/A
Bronchus
N/A
N/A
Lung
N/A
Liver & gallbladder
N/A
Liver
N/A
Pancreas
N/A
Pancreas
N/A
Gastrointestinal tract
N/A
Kidney & urinary bladder
N/A
Male tissues
N/A
Testis
N/A
Epididymis
N/A
N/A
Prostate
N/A
Seminal vesicle
N/A
N/A
Female tissues
N/A
Breast
N/A
N/A
Vagina
N/A
N/A
Cervix, uterine
N/A
N/A
Ovary
N/A
Placenta
N/A
Adipose & soft tissue
N/A
Skin
N/A
Skin
N/A


PROTEIN EXPRESSION OVERVIEW

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Pending normal tissue annotation.


RNA EXPRESSION OVERVIEW

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HPA dataset
RNA tissue category:  Not detected

Organ

Expression

GTEx dataset
RNA tissue category:  Tissue enhanced (adipose tissue)

Organ

Expression



GENE INFORMATION

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Gene name

SHOX (HGNC Symbol)

Synonyms

GCFX, PHOG, SHOXY, SS

Description

Short stature homeobox (HGNC Symbol)

Entrez gene summary

This gene belongs to the paired homeobox family and is located in the pseudoautosomal region 1 (PAR1) of X and Y chromosomes. Defects in this gene are associated with idiopathic growth retardation and in the short stature phenotype of Turner syndrome patients. This gene is highly conserved across species from mammals to fish to flies. Alternatively spliced transcript variants encoding different isoforms have been noted for this gene. [provided by RefSeq, Jul 2008]

Chromosome

X

Cytoband

p22.33

Chromosome location (bp)

624344 - 659411

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000185960 (version 78.38)

Entrez gene

6473

UniProt

O15266 (UniProt - Evidence at protein level)

neXtProt

NX_O15266

Antibodypedia

SHOX antibodies


PROTEIN BROWSER

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ENST00000334060
 
ENST00000381575
 
ENST00000381578
 
ENST00000554971
 
 
 
 


PROTEIN INFORMATION

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Splice variant

Ensembl

UniProt

Protein class

Gene ontology

Length
(aa)

Molecular mass
(kDa)

Signal peptide
(predicted)

Transmembrane regions
(predicted)

SHOX-001 ENSP00000370987
ENST00000381575
O15266
Show all »
Show » Show » 225 25.5 No 0
SHOX-003 ENSP00000452016
ENST00000554971
O15266
Show all »
Show » Show » 292 32.2 No 0
SHOX-201 ENSP00000335505
ENST00000334060
O15266
Show all »
Show » Show » 225 25.5 No 0
SHOX-202 ENSP00000370990
ENST00000381578
O15266
Show all »
Show » Show » 292 32.2 No 0