HSH2D

COLON - Expression summary

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RNA expression

HPA:7.2 FPKM
GTEx:3.8 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA036616

 

Endothelial cells

Low  

Glandular cells

Low  

Peripheral nerve/ganglion

Medium  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

7.2

overview Male, age 54
Sample 1
FPKM: 9.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 7.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 8.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 3.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 9.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 3.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 7.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

3.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.3
Samples: 149

Max RPKM: 6.3
Min RPKM: 0
Std RPKM: 0.6
Median RPKM: 0.1
GTEX-WQUQ-2626-SM-4MVNP 6.3
GTEX-V955-1726-SM-4JBHF 2.9
GTEX-YJ8A-1726-SM-5P9IQ 2.3
GTEX-XBED-1726-SM-47JYO 2.3
GTEX-11ONC-1926-SM-5GU75 2.0
GTEX-Y5LM-1426-SM-5RQJL 1.9
GTEX-11EQ9-1526-SM-5PNY7 1.7
GTEX-13X6I-2726-SM-5Q5ET 1.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 7.3
Samples: 196

Max RPKM: 22.7
Min RPKM: 0
Std RPKM: 5.4
Median RPKM: 7.7
GTEX-13OW6-2126-SM-5N9GL 22.7
GTEX-ZVP2-1526-SM-5NQ82 20.5
GTEX-13OVJ-1726-SM-5IJDZ 19.7
GTEX-T5JW-1126-SM-4DM5V 19.1
GTEX-UPIC-1726-SM-4IHKG 18.0
GTEX-XBED-1526-SM-4AT5W 17.8
GTEX-133LE-1526-SM-5IFEN 17.5
GTEX-1399U-1926-SM-5IFH7 17.1
Show all