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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
425.7
nTPM
Monaco:
765.6
nTPM
Schmiedel:
472.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
425.7
HPA sample
nTPM
gdT-cell nTPM: 425.7
Samples: 6
Max nTPM: 605.8
Min nTPM: 300.2
P10809_1007
300.2
P10809_1022
605.8
P10809_1041
520.9
P10809_1060
336.7
P10809_1077
414.4
P10809_1098
376.4
MAIT T-cell nTPM: 350.0
Samples: 6
Max nTPM: 485.4
Min nTPM: 268.9
P10809_1006
289.1
P10809_1024
485.4
P10809_1043
387.4
P10809_1062
364.9
P10809_1083
268.9
P10809_1097
304.5
Memory CD4 T-cell nTPM: 343.5
Samples: 6
Max nTPM: 378.5
Min nTPM: 264.1
P10809_1014
264.1
P10809_1026
378.5
P10809_1045
366.7
P10809_1064
359.0
P10809_1086
368.7
P10809_1113
323.8
Memory CD8 T-cell nTPM: 368.8
Samples: 5
Max nTPM: 435.8
Min nTPM: 299.1
P10809_1012
306.6
P10809_1027
396.0
P10809_1046
435.8
P10809_1065
406.4
P10809_1111
299.1
Naive CD4 T-cell nTPM: 371.4
Samples: 6
Max nTPM: 442.7
Min nTPM: 223.8
P10809_1015
223.8
P10809_1030
410.5
P10809_1049
442.7
P10809_1068
379.7
P10809_1085
397.8
P10809_1112
374.0
Naive CD8 T-cell nTPM: 350.0
Samples: 6
Max nTPM: 462.1
Min nTPM: 227.4
P10809_1016
227.4
P10809_1031
393.4
P10809_1050
329.9
P10809_1069
462.1
P10809_1087
395.3
P10809_1110
292.1
T-reg nTPM: 422.8
Samples: 6
Max nTPM: 477.5
Min nTPM: 352.2
P10809_1018
352.2
P10809_1037
477.5
P10809_1056
438.3
P10809_1075
414.2
P10809_1094
463.5
P10809_1106
390.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
765.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 488.4
Samples: 4
Max nTPM: 581.3
Min nTPM: 451.6
RHH5202_R3573
451.6
RHH5230_R3602
581.3
RHH5259_R3631
459.6
RHH5288_R3660
461.2
Effector memory CD8 T-cell nTPM: 691.9
Samples: 4
Max nTPM: 824.3
Min nTPM: 594.6
RHH5203_R3574
594.6
RHH5231_R3603
682.6
RHH5260_R3632
666.0
RHH5289_R3661
824.3
MAIT T-cell nTPM: 525.3
Samples: 4
Max nTPM: 675.2
Min nTPM: 449.7
RHH5233_R3605
521.6
RHH5205_R3576
675.2
RHH5262_R3634
454.6
RHH5297_R3663
449.7
Memory CD4 T-cell TFH nTPM: 512.8
Samples: 4
Max nTPM: 628.0
Min nTPM: 442.7
RHH5300_R3666
442.7
RHH5236_R3608
628.0
RHH5265_R3637
477.3
RHH5208_R3579
503.1
Memory CD4 T-cell Th1 nTPM: 491.8
Samples: 4
Max nTPM: 560.1
Min nTPM: 438.1
RHH5210_R3581
460.2
RHH5302_R3668
438.1
RHH5238_R3610
560.1
RHH5267_R3639
508.6
Memory CD4 T-cell Th1/Th17 nTPM: 582.5
Samples: 4
Max nTPM: 667.2
Min nTPM: 512.6
RHH5303_R3669
574.5
RHH5211_R3582
575.6
RHH5239_R3611
667.2
RHH5268_R3640
512.6
Memory CD4 T-cell Th17 nTPM: 597.7
Samples: 4
Max nTPM: 784.1
Min nTPM: 501.9
RHH5304_R3670
556.5
RHH5212_R3583
548.3
RHH5240_R3612
784.1
RHH5269_R3641
501.9
Memory CD4 T-cell Th2 nTPM: 515.7
Samples: 4
Max nTPM: 538.7
Min nTPM: 489.4
RHH5305_R3671
489.4
RHH5213_R3584
538.7
RHH5241_R3613
530.8
RHH5270_R3642
503.8
Naive CD4 T-cell nTPM: 472.0
Samples: 4
Max nTPM: 505.2
Min nTPM: 422.3
RHH5306_R3672
422.3
RHH5214_R3585
505.2
RHH5242_R3614
486.7
RHH5271_R3643
473.9
Naive CD8 T-cell nTPM: 470.0
Samples: 4
Max nTPM: 559.6
Min nTPM: 399.9
RHH5201_R3572
457.6
RHH5229_R3601
559.6
RHH5258_R3630
399.9
RHH5287_R3659
462.7
Non-Vd2 gdTCR nTPM: 757.2
Samples: 4
Max nTPM: 876.9
Min nTPM: 618.7
RHH5235_R3607
853.5
RHH5264_R3636
679.6
RHH5207_R3578
876.9
RHH5299_R3665
618.7
T-reg nTPM: 560.2
Samples: 4
Max nTPM: 699.6
Min nTPM: 485.9
RHH5301_R3667
485.9
RHH5237_R3609
699.6
RHH5266_R3638
529.7
RHH5209_R3580
525.5
Terminal effector memory CD4 T-cell nTPM: 746.5
Samples: 2
Max nTPM: 831.8
Min nTPM: 661.2
RHH5243_R3615
831.8
RHH5272_R3644
661.2
Terminal effector memory CD8 T-cell nTPM: 765.6
Samples: 4
Max nTPM: 881.4
Min nTPM: 581.8
RHH5232_R3604
798.5
RHH5204_R3575
581.8
RHH5261_R3633
881.4
RHH5296_R3662
800.5
Vd2 gdTCR nTPM: 594.0
Samples: 4
Max nTPM: 685.2
Min nTPM: 445.2
RHH5234_R3606
579.0
RHH5206_R3577
685.2
RHH5263_R3635
666.4
RHH5298_R3664
445.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.