HMGN5

COLON - Expression summary

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RNA expression

HPA:11.8 FPKM
GTEx:3.7 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA000511

 

Endothelial cells

Medium  

Glandular cells

High  

Peripheral nerve/ganglion

Not detected  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

11.8

overview Male, age 54
Sample 1
FPKM: 13.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 10.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 15.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 10.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 7.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 11.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 12.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

3.7

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 3.7
Samples: 149

Max RPKM: 7.4
Min RPKM: 1.2
Std RPKM: 1.2
Median RPKM: 3.4
GTEX-131XG-1526-SM-5GCNQ 7.4
GTEX-ZVZQ-2626-SM-59HLB 7.2
GTEX-ZVT2-1726-SM-51MRO 6.9
GTEX-11GS4-1826-SM-5HL4T 6.8
GTEX-13111-1926-SM-5GCOL 6.6
GTEX-11TUW-2326-SM-5EQMO 6.6
GTEX-12ZZY-2726-SM-5EQ45 5.8
GTEX-ZE7O-2626-SM-51MSS 5.8
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 3.8
Samples: 196

Max RPKM: 8.3
Min RPKM: 1.4
Std RPKM: 1.2
Median RPKM: 3.7
GTEX-1128S-1626-SM-5H12O 8.3
GTEX-12ZZZ-2426-SM-5GCNN 7.8
GTEX-146FQ-1926-SM-5NQBY 7.0
GTEX-XV7Q-2126-SM-4BRVX 6.6
GTEX-11VI4-1526-SM-5EQKC 6.4
GTEX-XMK1-1726-SM-4B64Z 6.2
GTEX-111VG-2226-SM-5N9DU 6.1
GTEX-QMRM-1226-SM-447C6 6.0
Show all