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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
7974.9
nTPM
Monaco:
5119.6
nTPM
Schmiedel:
23632.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
7974.9
HPA sample
nTPM
gdT-cell nTPM: 5599.9
Samples: 6
Max nTPM: 9466.7
Min nTPM: 3536.2
P10809_1007
9466.7
P10809_1022
3808.1
P10809_1041
5973.3
P10809_1060
3536.2
P10809_1077
4768.3
P10809_1098
6046.5
MAIT T-cell nTPM: 6797.3
Samples: 6
Max nTPM: 7408.3
Min nTPM: 5367.1
P10809_1006
7408.3
P10809_1024
7096.7
P10809_1043
5367.1
P10809_1062
6680.2
P10809_1083
6979.5
P10809_1097
7252.0
Memory CD4 T-cell nTPM: 6211.3
Samples: 6
Max nTPM: 8420.4
Min nTPM: 4577.9
P10809_1014
8420.4
P10809_1026
7761.2
P10809_1045
4577.9
P10809_1064
6018.2
P10809_1086
5869.7
P10809_1113
4620.4
Memory CD8 T-cell nTPM: 6339.1
Samples: 5
Max nTPM: 8760.9
Min nTPM: 4346.0
P10809_1012
8760.9
P10809_1027
7145.5
P10809_1046
4699.4
P10809_1065
6743.8
P10809_1111
4346.0
Naive CD4 T-cell nTPM: 6406.3
Samples: 6
Max nTPM: 8730.2
Min nTPM: 4151.5
P10809_1015
8715.5
P10809_1030
8730.2
P10809_1049
5236.5
P10809_1068
5125.4
P10809_1085
6478.4
P10809_1112
4151.5
Naive CD8 T-cell nTPM: 7974.9
Samples: 6
Max nTPM: 11995.3
Min nTPM: 5780.7
P10809_1016
11995.3
P10809_1031
10037.4
P10809_1050
6522.9
P10809_1069
7177.1
P10809_1087
5780.7
P10809_1110
6336.0
T-reg nTPM: 5383.2
Samples: 6
Max nTPM: 6520.2
Min nTPM: 4498.1
P10809_1018
6520.2
P10809_1037
5198.6
P10809_1056
6119.2
P10809_1075
5302.0
P10809_1094
4498.1
P10809_1106
4660.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
5119.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 2702.1
Samples: 4
Max nTPM: 3635.8
Min nTPM: 1746.3
RHH5202_R3573
1746.3
RHH5230_R3602
2550.9
RHH5259_R3631
2875.5
RHH5288_R3660
3635.8
Effector memory CD8 T-cell nTPM: 2194.1
Samples: 4
Max nTPM: 3107.7
Min nTPM: 1545.4
RHH5203_R3574
1656.8
RHH5231_R3603
2466.3
RHH5260_R3632
3107.7
RHH5289_R3661
1545.4
MAIT T-cell nTPM: 3354.4
Samples: 4
Max nTPM: 4562.7
Min nTPM: 2566.2
RHH5233_R3605
2857.6
RHH5205_R3576
2566.2
RHH5262_R3634
3430.9
RHH5297_R3663
4562.7
Memory CD4 T-cell TFH nTPM: 3632.1
Samples: 4
Max nTPM: 7769.6
Min nTPM: 1802.3
RHH5300_R3666
2550.3
RHH5236_R3608
7769.6
RHH5265_R3637
1802.3
RHH5208_R3579
2406.2
Memory CD4 T-cell Th1 nTPM: 3352.7
Samples: 4
Max nTPM: 5102.7
Min nTPM: 1882.6
RHH5210_R3581
1882.6
RHH5302_R3668
5102.7
RHH5238_R3610
3611.7
RHH5267_R3639
2813.7
Memory CD4 T-cell Th1/Th17 nTPM: 3138.3
Samples: 4
Max nTPM: 4452.0
Min nTPM: 2216.3
RHH5303_R3669
4452.0
RHH5211_R3582
2216.3
RHH5239_R3611
2690.7
RHH5268_R3640
3194.1
Memory CD4 T-cell Th17 nTPM: 2574.6
Samples: 4
Max nTPM: 3132.6
Min nTPM: 2177.1
RHH5304_R3670
3132.6
RHH5212_R3583
2478.1
RHH5240_R3612
2510.5
RHH5269_R3641
2177.1
Memory CD4 T-cell Th2 nTPM: 2767.9
Samples: 4
Max nTPM: 3276.4
Min nTPM: 2333.6
RHH5305_R3671
3276.4
RHH5213_R3584
2655.2
RHH5241_R3613
2806.2
RHH5270_R3642
2333.6
Naive CD4 T-cell nTPM: 3690.2
Samples: 4
Max nTPM: 6505.7
Min nTPM: 2270.1
RHH5306_R3672
3599.9
RHH5214_R3585
6505.7
RHH5242_R3614
2270.1
RHH5271_R3643
2385.0
Naive CD8 T-cell nTPM: 3579.4
Samples: 4
Max nTPM: 5134.6
Min nTPM: 2180.0
RHH5201_R3572
2180.0
RHH5229_R3601
4158.6
RHH5258_R3630
2844.4
RHH5287_R3659
5134.6
Non-Vd2 gdTCR nTPM: 3317.2
Samples: 4
Max nTPM: 4524.0
Min nTPM: 2210.5
RHH5235_R3607
2819.2
RHH5264_R3636
3715.1
RHH5207_R3578
2210.5
RHH5299_R3665
4524.0
T-reg nTPM: 3740.4
Samples: 4
Max nTPM: 4497.2
Min nTPM: 2409.5
RHH5301_R3667
4021.7
RHH5237_R3609
4497.2
RHH5266_R3638
2409.5
RHH5209_R3580
4033.3
Terminal effector memory CD4 T-cell nTPM: 2956.6
Samples: 2
Max nTPM: 3111.8
Min nTPM: 2801.3
RHH5243_R3615
2801.3
RHH5272_R3644
3111.8
Terminal effector memory CD8 T-cell nTPM: 4081.0
Samples: 4
Max nTPM: 6679.6
Min nTPM: 2512.5
RHH5232_R3604
2512.5
RHH5204_R3575
6679.6
RHH5261_R3633
4116.5
RHH5296_R3662
3015.2
Vd2 gdTCR nTPM: 5119.6
Samples: 4
Max nTPM: 6723.9
Min nTPM: 2775.9
RHH5234_R3606
2775.9
RHH5206_R3577
6669.2
RHH5263_R3635
4309.3
RHH5298_R3664
6723.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.