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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
30.1
nTPM
Monaco:
32.2
nTPM
Schmiedel:
55.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
30.1
HPA sample
nTPM
gdT-cell nTPM: 18.7
Samples: 6
Max nTPM: 26.2
Min nTPM: 7.9
P10809_1007
17.8
P10809_1022
26.2
P10809_1041
18.2
P10809_1060
7.9
P10809_1077
20.8
P10809_1098
21.3
MAIT T-cell nTPM: 30.1
Samples: 6
Max nTPM: 46.6
Min nTPM: 19.4
P10809_1006
35.4
P10809_1024
24.5
P10809_1043
46.6
P10809_1062
23.7
P10809_1083
19.4
P10809_1097
31.0
Memory CD4 T-cell nTPM: 24.1
Samples: 6
Max nTPM: 29.6
Min nTPM: 11.0
P10809_1014
23.1
P10809_1026
29.6
P10809_1045
28.9
P10809_1064
26.7
P10809_1086
25.0
P10809_1113
11.0
Memory CD8 T-cell nTPM: 29.2
Samples: 5
Max nTPM: 44.3
Min nTPM: 21.4
P10809_1012
23.7
P10809_1027
27.8
P10809_1046
44.3
P10809_1065
21.4
P10809_1111
28.8
Naive CD4 T-cell nTPM: 26.5
Samples: 6
Max nTPM: 50.6
Min nTPM: 6.2
P10809_1015
21.0
P10809_1030
36.2
P10809_1049
50.6
P10809_1068
24.6
P10809_1085
6.2
P10809_1112
20.4
Naive CD8 T-cell nTPM: 28.6
Samples: 6
Max nTPM: 40.4
Min nTPM: 13.1
P10809_1016
34.7
P10809_1031
40.4
P10809_1050
34.6
P10809_1069
30.1
P10809_1087
13.1
P10809_1110
18.5
T-reg nTPM: 21.8
Samples: 6
Max nTPM: 58.8
Min nTPM: 4.7
P10809_1018
18.5
P10809_1037
26.8
P10809_1056
58.8
P10809_1075
16.9
P10809_1094
5.2
P10809_1106
4.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
32.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 19.7
Samples: 4
Max nTPM: 28.0
Min nTPM: 8.0
RHH5202_R3573
8.0
RHH5230_R3602
28.0
RHH5259_R3631
16.4
RHH5288_R3660
26.2
Effector memory CD8 T-cell nTPM: 7.6
Samples: 4
Max nTPM: 15.8
Min nTPM: 1.1
RHH5203_R3574
8.5
RHH5231_R3603
15.8
RHH5260_R3632
1.1
RHH5289_R3661
5.1
MAIT T-cell nTPM: 20.9
Samples: 4
Max nTPM: 35.7
Min nTPM: 9.9
RHH5233_R3605
9.9
RHH5205_R3576
10.5
RHH5262_R3634
27.5
RHH5297_R3663
35.7
Memory CD4 T-cell TFH nTPM: 18.7
Samples: 4
Max nTPM: 32.9
Min nTPM: 8.3
RHH5300_R3666
12.4
RHH5236_R3608
32.9
RHH5265_R3637
21.0
RHH5208_R3579
8.3
Memory CD4 T-cell Th1 nTPM: 19.8
Samples: 4
Max nTPM: 29.1
Min nTPM: 8.0
RHH5210_R3581
8.0
RHH5302_R3668
29.1
RHH5238_R3610
16.6
RHH5267_R3639
25.3
Memory CD4 T-cell Th1/Th17 nTPM: 12.0
Samples: 4
Max nTPM: 25.4
Min nTPM: 0.0
RHH5303_R3669
0.0
RHH5211_R3582
16.9
RHH5239_R3611
5.6
RHH5268_R3640
25.4
Memory CD4 T-cell Th17 nTPM: 23.9
Samples: 4
Max nTPM: 51.1
Min nTPM: 9.9
RHH5304_R3670
9.9
RHH5212_R3583
51.1
RHH5240_R3612
12.3
RHH5269_R3641
22.3
Memory CD4 T-cell Th2 nTPM: 13.8
Samples: 4
Max nTPM: 28.6
Min nTPM: 0.9
RHH5305_R3671
28.6
RHH5213_R3584
0.9
RHH5241_R3613
11.4
RHH5270_R3642
14.1
Naive CD4 T-cell nTPM: 30.4
Samples: 4
Max nTPM: 41.0
Min nTPM: 23.8
RHH5306_R3672
31.3
RHH5214_R3585
41.0
RHH5242_R3614
23.8
RHH5271_R3643
25.6
Naive CD8 T-cell nTPM: 31.9
Samples: 4
Max nTPM: 59.6
Min nTPM: 7.9
RHH5201_R3572
7.9
RHH5229_R3601
12.2
RHH5258_R3630
47.9
RHH5287_R3659
59.6
Non-Vd2 gdTCR nTPM: 19.0
Samples: 4
Max nTPM: 53.9
Min nTPM: 0.0
RHH5235_R3607
0.0
RHH5264_R3636
14.2
RHH5207_R3578
7.9
RHH5299_R3665
53.9
T-reg nTPM: 23.2
Samples: 4
Max nTPM: 40.0
Min nTPM: 13.3
RHH5301_R3667
40.0
RHH5237_R3609
21.9
RHH5266_R3638
13.3
RHH5209_R3580
17.5
Terminal effector memory CD4 T-cell nTPM: 20.5
Samples: 2
Max nTPM: 21.4
Min nTPM: 19.5
RHH5243_R3615
21.4
RHH5272_R3644
19.5
Terminal effector memory CD8 T-cell nTPM: 15.6
Samples: 4
Max nTPM: 32.4
Min nTPM: 5.7
RHH5232_R3604
12.1
RHH5204_R3575
32.4
RHH5261_R3633
12.2
RHH5296_R3662
5.7
Vd2 gdTCR nTPM: 32.2
Samples: 4
Max nTPM: 58.0
Min nTPM: 19.5
RHH5234_R3606
19.5
RHH5206_R3577
26.9
RHH5263_R3635
24.4
RHH5298_R3664
58.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.