C6orf47

GENERAL INFORMATION

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Gene name

C6orf47

Gene description

Chromosome 6 open reading frame 47

Protein class

Predicted membrane proteins

Predicted localization

Membrane

Number of transcripts

1
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HUMAN PROTEIN ATLAS INFORMATION

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RNA tissue category

HPA:Expressed in all
GTEx:Expressed in all

Protein evidence

Evidence at protein level

Protein localization

Moderate cytoplasmic and nuclear positivity was displayed in respiratory epithelia, gastrointestinal glands, thyroid, decidual cells, chondrocytes and fibroblasts. Urothelial cells and Leydig cells were strongly stained. Remaining normal tissues were in general weakly stained or negative.

ANTIBODY RELIABILITY

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Data reliability
description

Pending RNA-based expert annotation.

Data reliability

Uncertain based on 1 antibody.
HPA045281
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RNA AND PROTEIN EXPRESSION SUMMARY

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RNA expression (FPKM) Protein expression (score)
Brain
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Adipose & soft tissue
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis



PROTEIN EXPRESSION OVERVIEW

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Organ

Expression



RNA EXPRESSION OVERVIEW

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HPA dataset
RNA tissue category:  Expressed in all

Organ

Expression

GTEx dataset
RNA tissue category:  Expressed in all

Organ

Expression



GENE INFORMATION

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Gene name

C6orf47 (HGNC Symbol)

Synonyms

D6S53E, G4

Description

Chromosome 6 open reading frame 47 (HGNC Symbol)

Entrez gene summary

Chromosome

6

Cytoband

p21.33

Chromosome location (bp)

31658298 - 31660772

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000204439 (version 78.38)

Entrez gene

57827

UniProt

O95873 (UniProt - Evidence at transcript level)

neXtProt

NX_O95873

Antibodypedia

C6orf47 antibodies


PROTEIN BROWSER

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ENST00000375911
 
 
 
 


PROTEIN INFORMATION

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Splice variant

Ensembl

UniProt

Protein class

Gene ontology

Length
(aa)

Molecular mass
(kDa)

Signal peptide
(predicted)

Transmembrane regions
(predicted)

C6orf47-001 ENSP00000365076
ENST00000375911
O95873
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