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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
165.9
nTPM
HPA Brain:
137.3
nTPM
GTEx:
165.9
nTPM
FANTOM5:
94.8
Scaled Tags Per Million
Pig:
181.7
nTPM
Mouse:
70.5
nTPM
Allen mouse:
6.1
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
137.3
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 125.0
2666
Male, age 74, left hemisphere
135.5
2586
Male, age 75, left hemisphere
133.7
1870
Female, age 42, unknown
132.3
2411
Female, age 72, unknown
131.2
1827
Male, age 72, unknown
129.3
1830
Male, age 51, unknown
127.4
1833
Male, age 53, unknown
127.2
2019
Male, age 18, unknown
126.1
2828
Female, age 72, unknown
122.6
2219
Male, age 76, both hemispheres
84.6
Dorsal raphe nucleus nTPM: 126.2
2298
Female, age 72, unknown
145.8
2047
Male, age 72, unknown
135.1
2750
Male, age 76, both hemispheres
128.7
1828
Male, age 53, unknown
114.1
2016
Female, age 72, unknown
107.3
Inferior colliculus nTPM: 128.0
2849
Male, age 72, unknown
133.8
1848
Female, age 42, unknown
132.1
1890
Male, age 53, unknown
125.9
2097
Female, age 72, unknown
120.2
Median raphe nucleus nTPM: 113.5
2220
Male, age 76, midline
113.5
Periaquaductal grey, anterior nTPM: 122.1
1947
Male, age 18, unknown
129.1
2502
Female, age 75, unknown
128.9
1795
Male, age 51, unknown
108.3
Periaquaductal grey, dorsal nTPM: 108.8
1840
Male, age 53, unknown
118.2
2850
Male, age 76, both hemispheres
110.7
2464
Female, age 72, unknown
107.1
1831
Male, age 72, unknown
99.0
Periaquaductal grey, lateral nTPM: 106.4
2053
Male, age 18, unknown
108.0
2140
Male, age 76, both hemispheres
106.5
2272
Male, age 74, both hemispheres
104.9
Pretectal area nTPM: 117.0
2007
Male, age 72, unknown
143.5
1817
Female, age 42, unknown
136.8
2667
Female, age 75, unknown
126.7
1815
Male, age 53, unknown
120.6
2825
Male, age 18, unknown
118.1
1816
Male, age 51, unknown
114.5
2224
Female, age 72, unknown
111.2
2407
Male, age 75, both hemispheres
109.0
1944
Female, age 72, unknown
104.1
2316
Male, age 76, right hemisphere
103.1
2273
Male, age 74, both hemispheres
99.8
Red nucleus nTPM: 137.3
1821
Female, age 72, unknown
156.4
2769
Male, age 72, unknown
151.1
2785
Male, age 18, unknown
143.6
2227
Male, age 72, unknown
142.6
1904
Male, age 53, unknown
140.8
2588
Male, age 74, left hemisphere
139.1
1865
Male, age 51, unknown
137.6
2503
Female, age 72, unknown
134.7
1954
Female, age 42, unknown
130.7
2823
Male, age 76, right hemisphere
126.9
2584
Male, age 75, left hemisphere
123.1
2725
Female, age 75, unknown
120.8
Substantia nigra nTPM: 107.4
1889
Female, age 72, unknown
130.1
1916
Female, age 42, unknown
124.1
2665
Male, age 74, both hemispheres
122.4
1851
Male, age 51, unknown
116.9
1941
Male, age 53, unknown
115.7
2583
Male, age 75, right hemisphere
114.6
2699
Male, age 18, unknown
100.9
2590
Female, age 75, unknown
96.0
2409
Female, age 72, unknown
81.4
2241
Male, age 72, unknown
72.3
Superior colliculus nTPM: 120.6
2587
Male, age 74, left hemisphere
147.6
1839
Male, age 51, unknown
130.9
2668
Female, age 75, unknown
129.7
1895
Male, age 76, right hemisphere
123.2
2664
Male, age 75, both hemispheres
122.6
1796
Male, age 53, unknown
118.8
1995
Male, age 72, unknown
115.1
1913
Female, age 42, unknown
111.6
2261
Male, age 18, unknown
107.8
2087
Female, age 72, unknown
98.6
Ventral tegmental area nTPM: 117.3
2223
Female, age 72, unknown
134.0
2410
Female, age 72, unknown
131.0
1915
Female, age 42, unknown
120.9
2218
Male, age 76, both hemispheres
109.9
1942
Male, age 51, unknown
107.0
2021
Male, age 53, unknown
100.8
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
165.9
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 165.9
Samples: 139
Max nTPM: 329.8
Min nTPM: 87.8
Std nTPM: 40.9
Median nTPM: 158.1
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
329.8
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
315.1
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
303.3
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
302.1
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
256.5
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
245.6
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
235.3
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
231.0
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
229.5
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
227.8
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
225.2
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
222.8
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
221.4
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
218.6
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
218.6
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
216.2
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
211.8
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
205.2
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
202.4
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
201.4
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
200.9
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
198.8
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
197.6
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
196.9
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
194.4
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
194.0
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
193.2
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
192.3
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
191.4
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
191.2
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
191.2
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
188.5
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
188.4
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
187.6
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
186.4
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
182.6
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
182.0
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
181.1
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
180.7
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
180.7
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
180.3
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
175.8
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
174.9
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
174.8
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
174.4
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
172.2
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
171.4
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
169.7
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
169.6
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
169.4
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
169.0
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
168.9
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
168.8
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
168.6
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
167.5
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
167.5
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
166.8
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
166.5
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
164.6
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
164.5
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
162.5
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
162.2
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
162.0
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
161.4
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
160.9
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
160.9
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
160.1
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
159.8
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
158.4
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
158.1
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
158.0
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
157.4
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
156.5
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
156.0
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
155.7
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
155.5
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
155.5
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
155.3
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
154.8
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
153.6
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
153.3
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
152.9
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
151.1
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
150.7
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
150.1
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
149.6
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
149.6
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
149.2
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
148.9
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
147.9
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
147.8
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
147.2
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
146.6
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
146.3
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
146.1
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
145.6
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
145.4
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
144.7
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
144.6
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
143.8
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
143.7
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
143.6
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
142.6
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
141.7
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
138.6
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
138.1
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
137.7
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
137.7
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
137.5
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
136.8
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
136.5
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
135.8
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
134.1
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
133.0
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
132.2
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
132.1
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
130.7
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
129.5
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
129.5
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
128.6
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
127.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
126.3
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
124.8
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
124.4
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
124.1
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
123.7
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
123.1
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
122.8
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
122.6
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
121.3
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
119.0
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
118.4
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
118.0
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
117.0
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
105.5
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
100.3
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
94.2
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
88.7
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
87.8
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
70.5
Mouse sample
Sample description
nTPM
Midbrain nTPM: 70.5
Samples: 4
Max nTPM: 84.1
Min nTPM: 57.6
Sample A
Male
84.1
Sample B
Male
67.4
Sample C
Female
57.6
Sample D
Female
72.8
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.