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TISSUE PRIMARY DATA SALIVARY GLAND Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Salivary gland
Tissue proteome
Salivary gland
Tissue methods
SALIVARY GLAND - Expression summary
Protein expression
Salivary glandi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:188.3 nTPM
HPA:87.5 nTPM
GTEx:188.3 nTPM
FANTOM5:0.0 Scaled Tags Per Million
SALIVARY GLAND - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SALIVARY GLAND - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA035304Antibody CAB000020
Glandular cells Not detectedMedium





SALIVARY GLAND - TISSUE (MS)i

The MS-based protein data details section shows detailed information about the individual samples used for the relative protein abundance measurements.

Intensity values provides a relative protein abundance comparable between different genes and samples. All samples comes from one female donor. Median detection value represents the tissue for specificity and distribution categories. Protein detection is defined as a non-missing intensity value, and protein values are set to missing for a tissue if more than half of its replicates lacked a measurement for that protein.

Read more
Median intensity 838712
Replicate Intensity
Salivary gland_01
838712
Salivary gland_02
866038
Salivary gland_03
775935

SALIVARY GLAND - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

87.5
overview
Female, age 68
Salivary gland sample 216
nTPM: 103.9
Cell types%
Glandular cells:
45

Ductal cells:
25

Adipocytes:
5

Other cell types:
25

overview
Male, age 60
Salivary gland sample 217
nTPM: 90.3
Cell types%
Glandular cells:
55

Ductal cells:
20

Adipocytes:
5

Endothelial cells:
5

Other cell types:
15

overview
Female, age 21
Salivary gland sample 218
nTPM: 68.3
Cell types%
Glandular cells:
55

Ductal cells:
15

Adipocytes:
5

Endothelial cells:
5

Other cell types:
20


SALIVARY GLAND - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

188.3
GTEx sample id Sample description nTPM
Minor Salivary Gland
Average nTPM: 188.3
Samples: 181

Max nTPM: 420.3
Min nTPM: 91.9
Std nTPM: 57.9
Median nTPM: 177.5
GTEX-1NSGN-0626-SM-E9J35 50-59 years, male 420.3
GTEX-ZLFU-2226-SM-EXUS7 40-49 years, male 408.3
GTEX-Y5LM-1826-SM-4VDT9 40-49 years, female 406.8
GTEX-ZT9W-2126-SM-51MSF 50-59 years, male 369.0
GTEX-ZLWG-2026-SM-DO11F 50-59 years, female 353.1
GTEX-1R9PM-1726-SM-E76T2 20-29 years, male 339.1
GTEX-11ZTS-3026-SM-5EQM7 60-69 years, female 324.0
GTEX-131XH-2626-SM-5GCNP 50-59 years, male 314.1
GTEX-13CF2-2426-SM-5LZYL 60-69 years, male 313.3
GTEX-1O97I-2826-SM-HPAEO 60-69 years, male 305.3
GTEX-ZC5H-2726-SM-5KLZW 40-49 years, female 291.8
GTEX-ZPU1-2326-SM-57WEP 40-49 years, male 290.3
GTEX-13NYC-2626-SM-5K7VN 60-69 years, male 283.7
GTEX-1192X-2926-SM-5N9BA 50-59 years, male 277.0
GTEX-Y5V6-2226-SM-4VDTC 60-69 years, male 262.3
GTEX-131XF-2826-SM-5EGKH 60-69 years, male 259.7
GTEX-17KNJ-2726-SM-7KFRE 50-59 years, male 259.7
GTEX-1AYD5-2726-SM-7MXVG 50-59 years, male 253.5
GTEX-1I1HK-2526-SM-A96SM 60-69 years, male 252.1
GTEX-1C6VR-0726-SM-7P8OV 60-69 years, male 247.8
GTEX-11EMC-2526-SM-5PNVU 60-69 years, female 247.3
GTEX-ZF29-2126-SM-DNZYX 60-69 years, female 245.8
GTEX-14E1K-2626-SM-664OJ 50-59 years, male 245.4
GTEX-ZA64-1726-SM-5CVMF 20-29 years, male 242.4
GTEX-1PPH8-1526-SM-E6CQO 20-29 years, male 239.7
GTEX-11P82-0926-SM-5986X 20-29 years, male 238.5
GTEX-1S83E-0626-SM-E9TKC 40-49 years, male 237.4
GTEX-ZQUD-2126-SM-51MSY 30-39 years, male 234.5
GTEX-1R9K4-0526-SM-E76P1 60-69 years, male 233.7
GTEX-1JN6P-2526-SM-CNNPX 60-69 years, male 231.6
GTEX-1OJC3-1026-SM-E6CQK 20-29 years, male 230.3
GTEX-Y3I4-1926-SM-4TT8L 50-59 years, male 230.1
GTEX-ZAB5-2326-SM-5IJFR 50-59 years, male 227.8
GTEX-1QMI2-0426-SM-EWRND 60-69 years, male 226.8
GTEX-1RAZA-0626-SM-EAZ4H 20-29 years, male 225.5
GTEX-13JVG-2926-SM-5J2N9 60-69 years, male 225.4
GTEX-18QFQ-0626-SM-718AW 30-39 years, male 225.2
GTEX-1POEN-2226-SM-DPRXV 30-39 years, female 222.9
GTEX-1HCU7-0126-SM-C1YR3 50-59 years, male 221.2
GTEX-1I6K7-0926-SM-A96SV 40-49 years, male 220.2
GTEX-1314G-2026-SM-5LZUM 30-39 years, male 219.7
GTEX-18A67-0626-SM-7KFSL 50-59 years, male 217.8
GTEX-WY7C-1426-SM-4OND1 50-59 years, male 215.2
GTEX-13QBU-2126-SM-5KLZN 40-49 years, female 212.6
GTEX-WFJO-2026-SM-4LVM3 30-39 years, male 211.2
GTEX-1RQED-2926-SM-HPAFT 60-69 years, male 210.1
GTEX-1MCQQ-2226-SM-DLHC4 60-69 years, male 209.8
GTEX-1LVA9-2526-SM-EVR5H 50-59 years, male 209.2
GTEX-1CB4I-2526-SM-7MKG1 50-59 years, male 207.9
GTEX-12BJ1-2226-SM-5BC6G 60-69 years, male 207.7
GTEX-W5X1-2426-SM-HPAGA 40-49 years, female 204.8
GTEX-14JIY-3026-SM-6EU1R 60-69 years, male 204.1
GTEX-1KD4Q-2526-SM-CXZKL 40-49 years, male 202.8
GTEX-178AV-1426-SM-6LLID 40-49 years, male 202.1
GTEX-1GTWX-2526-SM-9JGHG 60-69 years, male 202.0
GTEX-14PN4-2526-SM-686ZG 50-59 years, male 201.4
GTEX-1AMEY-1126-SM-72D79 30-39 years, female 201.0
GTEX-1LVAO-2626-SM-EVR4S 60-69 years, male 200.0
GTEX-15EU6-2626-SM-7KUN4 50-59 years, male 199.9
GTEX-YF7O-2226-SM-5CVN8 50-59 years, male 198.6
GTEX-1HFI6-2826-SM-GA91I 40-49 years, male 198.2
GTEX-1GN1V-2926-SM-9JGI3 60-69 years, male 197.6
GTEX-WH7G-2126-SM-4M1XU 40-49 years, male 195.7
GTEX-ZP4G-1926-SM-57WDZ 20-29 years, female 194.9
GTEX-13111-2326-SM-5LZUQ 50-59 years, male 194.4
GTEX-WHSB-2326-SM-4M1XK 50-59 years, male 193.6
GTEX-111FC-2926-SM-5GZY7 60-69 years, male 193.2
GTEX-X3Y1-1926-SM-4PQZO 40-49 years, male 192.4
GTEX-1A3MV-1726-SM-72D68 30-39 years, male 191.5
GTEX-1R9K5-0626-SM-DPRZB 50-59 years, male 191.2
GTEX-1C64O-0626-SM-7DHL1 60-69 years, male 190.3
GTEX-1445S-2926-SM-5O993 60-69 years, male 190.1
GTEX-18A7B-2826-SM-7KFTK 70-79 years, male 189.1
GTEX-1IY9M-2926-SM-A96TH 60-69 years, male 189.1
GTEX-1PDJ9-2126-SM-HPAFH 20-29 years, male 187.9
GTEX-1R9PO-2626-SM-E6CPU 60-69 years, female 187.9
GTEX-XMK1-2626-SM-4B65R 40-49 years, male 187.7
GTEX-1IKJJ-2826-SM-GA8ZM 60-69 years, male 186.6
GTEX-11NV4-1926-SM-5N9D4 60-69 years, male 185.6
GTEX-13G51-2426-SM-5LZY8 60-69 years, male 185.1
GTEX-15RJE-2726-SM-6LPJ1 40-49 years, male 183.2
GTEX-1GMR2-2026-SM-7MKHK 50-59 years, male 182.5
GTEX-YJ8A-1826-SM-GNTAB 20-29 years, male 181.8
GTEX-1B8KZ-1726-SM-73KV7 50-59 years, male 181.4
GTEX-17MFQ-1626-SM-7938Z 20-29 years, male 181.3
GTEX-18D9U-2226-SM-7KFTN 40-49 years, male 180.8
GTEX-1S5ZU-0926-SM-HPAEX 20-29 years, female 179.9
GTEX-1C4CL-2026-SM-731EB 30-39 years, male 179.7
GTEX-13OVL-2926-SM-5IFG3 50-59 years, male 178.4
GTEX-1OJC4-3126-SM-EXOJK 50-59 years, female 177.9
GTEX-1QCLZ-2526-SM-EXUST 60-69 years, female 177.5
GTEX-12WSM-1826-SM-5BC64 60-69 years, male 177.1
GTEX-Z9EW-1426-SM-HPAG9 40-49 years, male 177.1
GTEX-1KD5A-2226-SM-EV79U 50-59 years, male 175.9
GTEX-WOFM-2126-SM-4M9R4 20-29 years, male 175.9
GTEX-13O21-1926-SM-5MR39 50-59 years, male 175.2
GTEX-ZXG5-2826-SM-5NQ8T 60-69 years, male 174.4
GTEX-1HR9M-2526-SM-A9G3J 60-69 years, male 174.0
GTEX-1IOXB-2826-SM-AHZ32 50-59 years, male 173.6
GTEX-1RNSC-2926-SM-EV79L 60-69 years, male 173.5
GTEX-1PIEJ-0626-SM-DTX99 20-29 years, female 173.3
GTEX-1J8EW-2826-SM-A96T9 60-69 years, female 172.9
GTEX-1LBAC-0626-SM-D3L9T 20-29 years, male 172.8
GTEX-X261-2426-SM-4PQZU 50-59 years, male 172.7
GTEX-1B8SF-1826-SM-731DJ 60-69 years, male 171.7
GTEX-1HGF4-2326-SM-GA91Q 60-69 years, male 171.3
GTEX-1LSNL-2626-SM-EV7AT 50-59 years, male 170.7
GTEX-1MGNQ-1926-SM-DTX8L 40-49 years, male 169.5
GTEX-1S5VW-1026-SM-HK797 60-69 years, male 169.3
GTEX-14PJN-1726-SM-69LO7 30-39 years, male 168.6
GTEX-1NHNU-2226-SM-GRR2I 50-59 years, male 168.5
GTEX-145ME-1626-SM-5RQI3 40-49 years, female 168.2
GTEX-1H4P4-2026-SM-9WPNV 50-59 years, male 168.2
GTEX-1ICLY-0626-SM-GA915 50-59 years, male 167.1
GTEX-X5EB-1726-SM-4E3J7 40-49 years, male 166.3
GTEX-1339X-2326-SM-5HL5B 40-49 years, male 164.4
GTEX-14B4R-1426-SM-5Q5CG 30-39 years, male 164.3
GTEX-11TUW-2426-SM-5EQKB 60-69 years, male 164.1
GTEX-X15G-2126-SM-4PQZR 50-59 years, female 163.7
GTEX-13NYB-2426-SM-5IFF4 40-49 years, male 163.5
GTEX-1AX9K-2126-SM-72D7K 50-59 years, male 162.5
GTEX-1J1R8-1826-SM-AHZ3B 40-49 years, male 161.8
GTEX-1KANC-1326-SM-CYPT8 50-59 years, female 161.6
GTEX-Y111-2626-SM-4TT24 50-59 years, male 161.3
GTEX-1C64N-2926-SM-79OLM 50-59 years, male 160.8
GTEX-1IDJD-2526-SM-C1YSA 30-39 years, male 160.0
GTEX-1JN1M-2426-SM-ARU93 60-69 years, female 159.7
GTEX-11WQK-2926-SM-5EQKT 50-59 years, male 158.4
GTEX-1GPI7-0326-SM-7MKH6 20-29 years, male 158.4
GTEX-1EH9U-2926-SM-7DHLX 60-69 years, male 158.2
GTEX-11P81-2026-SM-5P9GT 30-39 years, female 157.8
GTEX-1QEPI-0626-SM-E76QE 60-69 years, female 157.0
GTEX-12WSL-2126-SM-5GCNG 50-59 years, male 156.8
GTEX-1AX8Z-0626-SM-731EH 60-69 years, male 156.1
GTEX-1HSEH-1826-SM-A96SA 60-69 years, male 152.5
GTEX-XV7Q-2426-SM-4BRV8 40-49 years, female 152.2
GTEX-13OVK-1826-SM-6PALE 40-49 years, male 149.4
GTEX-ZE7O-2926-SM-51MSG 50-59 years, female 148.7
GTEX-ZG7Y-2426-SM-DO11H 50-59 years, male 148.4
GTEX-146FR-1226-SM-5MR78 60-69 years, female 146.7
GTEX-XGQ4-2626-SM-4AT6B 50-59 years, male 146.7
GTEX-1QP9N-2026-SM-DPRZT 30-39 years, male 145.6
GTEX-WYVS-2026-SM-4RGNS 40-49 years, female 144.6
GTEX-1J8QM-1826-SM-A96TA 60-69 years, female 144.5
GTEX-1HSGN-0626-SM-A9G2E 40-49 years, female 144.4
GTEX-1I6K6-0626-SM-ARU7J 30-39 years, male 141.4
GTEX-14PJ3-1526-SM-664O9 50-59 years, male 140.8
GTEX-1HSMQ-0926-SM-A96SI 50-59 years, male 139.2
GTEX-1GZ2Q-2526-SM-9KNVW 40-49 years, male 139.1
GTEX-1P4AB-2926-SM-EXOJR 50-59 years, male 138.8
GTEX-15CHC-1226-SM-686ZH 60-69 years, female 137.5
GTEX-11ZTT-2226-SM-5CVLP 60-69 years, female 137.3
GTEX-1IDJV-2326-SM-GA8ZL 60-69 years, male 135.3
GTEX-12WSN-2226-SM-5DUXT 40-49 years, male 135.0
GTEX-15SHV-2226-SM-6M464 60-69 years, male 134.1
GTEX-11EQ9-2026-SM-5P9JI 30-39 years, male 133.6
GTEX-1JKYR-0726-SM-AHZ3K 20-29 years, male 132.8
GTEX-13113-1526-SM-5EGHV 60-69 years, female 132.3
GTEX-1117F-3026-SM-5GZYU 60-69 years, female 131.6
GTEX-1IE54-0826-SM-AHZ2Z 40-49 years, female 128.2
GTEX-1B932-0626-SM-731EM 40-49 years, female 128.0
GTEX-13VXT-1726-SM-5IFF5 20-29 years, female 127.8
GTEX-1HSMP-1926-SM-GA8Z5 70-79 years, male 126.3
GTEX-1IDJC-1626-SM-AHZ2R 50-59 years, male 125.2
GTEX-13OVI-2326-SM-5KM47 60-69 years, female 124.6
GTEX-1MCC2-2226-SM-EV7AJ 30-39 years, female 124.0
GTEX-1QP28-2026-SM-F2I3M 50-59 years, female 123.0
GTEX-1LVAM-0626-SM-HPAFZ 50-59 years, female 121.5
GTEX-1LH75-2726-SM-HL11E 50-59 years, female 119.7
GTEX-YB5K-1726-SM-5IFIZ 40-49 years, female 119.6
GTEX-1B97J-2126-SM-79OL6 50-59 years, female 117.4
GTEX-15SDE-1226-SM-HAV36 50-59 years, female 116.7
GTEX-1I4MK-1326-SM-B2LWT 50-59 years, female 112.5
GTEX-1HFI7-2426-SM-B2LXV 50-59 years, female 110.2
GTEX-13QJC-2326-SM-5Q5CD 60-69 years, female 108.7
GTEX-1LC47-2426-SM-DHXKK 60-69 years, male 107.6
GTEX-1GN1W-2526-SM-9JGHX 50-59 years, female 104.9
GTEX-1H1CY-2326-SM-9OSXW 60-69 years, female 102.1
GTEX-1GF9X-0226-SM-7P8SM 40-49 years, female 101.2
GTEX-1S82P-0726-SM-EVR4O 60-69 years, female 94.3
GTEX-1LKK1-2926-SM-EVR4Z 50-59 years, female 91.9
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SALIVARY GLAND - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

0
FANTOM5 sample id Sample description Scaled Tags Per Million
Parotid gland
Scaled Tags Per Million: 0.0
FF:10199-103F1 23 years, male 0.0
Salivary gland
Scaled Tags Per Million: 0.0
FF:10093-102C3 16-60 years, mixed 0.0
Submaxillary gland
Scaled Tags Per Million: 0.0
FF:10202-103F4 24 years, male 0.0

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