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KLHL13
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  • KLHL13
TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:11.7 nTPM
HPA Brain:22.8 nTPM
GTEx:11.7 nTPM
FANTOM5:30.4 Scaled Tags Per Million
Pig:79.2 nTPM
Mouse:139.4 nTPM
Allen mouse:1.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA046039
Glial cells Not detected
Neuronal cells Not detected


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

22.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 22.0
1857 Female, age 85, left hemisphere 37.5
1854 Male, age 80, left hemisphere 30.3
2846 Female, age 79, unknown 26.6
2290 Female, age 72, unknown 22.3
1781 Male, age 74, unknown 17.9
2288 Male, age 75, left hemisphere 14.7
2289 Male, age 61, right hemisphere 13.5
2481 Female, age 94, left hemisphere 12.9
Globus pallidus, externus
nTPM: 4.8
2395 Male, age 75, both hemispheres 6.1
2772 Female, age 79, unknown 5.3
1996 Male, age 80, right hemisphere 5.0
2646 Male, age 61, right hemisphere 4.7
2567 Female, age 72, unknown 2.7
Globus pallidus, internus
nTPM: 6.0
1818 Male, age 74, unknown 8.9
2483 Female, age 94, right hemisphere 7.6
2287 Male, age 75, right hemisphere 6.3
2778 Female, age 91, both hemispheres 6.2
2037 Male, age 80, right hemisphere 5.9
2566 Female, age 72, unknown 4.5
2111 Female, age 85, right hemisphere 2.6
Nucleus accumbens
nTPM: 22.8
1856 Female, age 91, right hemisphere 44.2
1806 Female, age 85, left hemisphere 34.7
1783 Male, age 74, unknown 27.7
2824 Male, age 61, right hemisphere 27.7
2698 Female, age 72, unknown 18.2
2286 Male, age 75, left hemisphere 12.2
2732 Male, age 80, right hemisphere 9.6
2391 Female, age 94, left hemisphere 7.6
Nucleus basalis of Meynert
nTPM: 10.9
2393 Male, age 80, right hemisphere 21.0
2484 Female, age 94, left hemisphere 10.7
2821 Male, age 75, both hemispheres 7.7
2569 Male, age 61, both hemispheres 4.1
Nucleus of the diagonal band
nTPM: 9.9
2775 Male, age 80, right hemisphere 12.9
1979 Male, age 74, unknown 10.6
1812 Female, age 91, both hemispheres 10.1
2195 Female, age 85, both hemispheres 10.0
2029 Male, age 61, right hemisphere 5.7
Putamen
nTPM: 21.3
1838 Male, age 80, right hemisphere 37.7
1937 Female, age 91, right hemisphere 32.8
2466 Female, age 79, unknown 28.1
1829 Male, age 74, unknown 23.5
2482 Female, age 94, left hemisphere 10.4
2489 Female, age 72, unknown 9.4
2647 Male, age 75, left hemisphere 7.2
Septal nuclei
nTPM: 10.4
2009 Female, age 91, both hemispheres 12.6
1960 Male, age 74, unknown 11.6
2629 Female, age 94, right hemisphere 10.2
2394 Male, age 61, left hemisphere 10.1
2059 Female, age 85, both hemispheres 10.0
2199 Male, age 80, right hemisphere 9.9
2031 Female, age 72, unknown 8.2
Stria terminalis, bed nucleus
nTPM: 9.6
1974 Female, age 91, both hemispheres 11.2
2486 Female, age 94, both hemispheres 9.2
2201 Male, age 74, unknown 8.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

11.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 11.7
Samples: 246

Max nTPM: 45.5
Min nTPM: 1.8
Std nTPM: 6.8
Median nTPM: 10.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 45.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 34.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 33.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 29.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 28.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 27.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 27.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 26.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 25.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 25.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 24.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 24.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 24.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 23.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 23.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 22.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 22.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 22.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 22.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 21.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 21.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 21.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 21.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 20.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 20.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 20.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 20.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 19.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 19.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 19.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 19.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 19.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 19.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 18.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 18.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 18.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 18.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 18.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 18.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 18.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 17.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 17.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 17.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 17.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 17.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 17.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 17.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 17.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 17.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 17.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 16.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 16.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 16.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 16.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 16.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 16.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 16.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 16.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 16.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 16.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 16.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 16.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 16.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 16.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 16.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 15.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 15.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 15.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 15.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 15.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 15.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 15.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 15.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 14.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 14.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 14.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 14.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 14.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 14.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 14.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 14.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 14.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 14.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 14.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 13.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 13.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 13.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 13.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 13.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 13.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 13.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 13.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 13.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 13.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 13.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 13.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 12.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 12.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 12.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 12.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 12.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 12.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 12.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 12.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 12.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 12.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 12.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 12.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 12.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 12.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 11.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 11.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 11.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 11.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 11.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 11.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 11.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 10.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 10.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 10.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 10.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 10.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 10.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 10.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 10.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 10.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 10.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 10.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 10.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 9.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 9.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 9.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 9.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 9.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 9.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 9.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 9.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 9.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 9.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 9.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 9.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 9.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 9.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 9.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 9.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 9.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 9.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 8.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 8.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 8.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 8.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 8.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 8.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 8.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 8.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 8.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 8.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 8.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 8.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 8.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 8.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 7.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 7.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 7.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 7.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 7.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 7.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 7.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 7.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 7.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 7.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 7.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 7.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 7.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 7.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 6.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 6.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 6.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 6.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 6.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 6.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 6.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 6.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 6.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 6.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 5.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 5.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 5.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 5.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 5.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 5.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 5.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 5.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 5.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 5.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 5.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 5.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 5.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 5.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 5.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 5.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 4.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 4.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 4.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 4.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 4.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 4.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 4.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 4.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 4.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 4.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 4.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 4.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 4.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 4.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 3.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 3.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 3.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 3.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 3.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 3.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 3.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 3.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 3.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 3.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 3.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 3.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 3.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 3.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 3.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 3.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 3.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 3.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 3.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 3.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 3.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 2.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 2.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 2.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 2.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 2.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 2.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 2.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 2.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 2.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 11.5
Samples: 246

Max nTPM: 28.7
Min nTPM: 1.0
Std nTPM: 6.1
Median nTPM: 10.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 28.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 28.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 28.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 25.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 24.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 24.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 23.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 23.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 23.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 23.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 22.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 22.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 22.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 22.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 22.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 22.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 21.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 21.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 21.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 20.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 20.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 20.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 20.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 20.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 20.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 20.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 20.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 19.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 19.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 19.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 19.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 19.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 19.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 19.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 18.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 18.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 18.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 18.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 18.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 18.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 17.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 17.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 17.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 17.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 17.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 17.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 17.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 17.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 17.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 17.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 16.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 16.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 16.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 16.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 15.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 15.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 15.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 15.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 15.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 15.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 15.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 15.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 15.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 15.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 15.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 15.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 15.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 15.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 15.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 15.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 15.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 15.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 15.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 15.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 14.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 14.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 14.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 14.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 14.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 13.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 13.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 13.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 13.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 13.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 13.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 13.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 13.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 13.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 13.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 13.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 13.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 13.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 12.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 12.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 12.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 12.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 12.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 12.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 12.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 12.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 12.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 12.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 12.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 12.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 12.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 12.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 12.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 12.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 12.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 12.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 11.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 11.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 11.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 11.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 11.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 11.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 11.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 11.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 11.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 11.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 11.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 11.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 10.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 10.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 10.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 10.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 10.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 10.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 10.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 10.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 10.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 10.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 10.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 10.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 10.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 10.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 10.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 10.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 10.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 10.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 10.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 9.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 9.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 9.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 9.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 9.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 9.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 9.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 9.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 9.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 9.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 9.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 9.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 9.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 9.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 8.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 8.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 8.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 8.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 8.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 8.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 8.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 8.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 8.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 8.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 8.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 8.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 8.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 8.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 8.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 8.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 8.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 7.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 7.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 7.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 7.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 7.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 7.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 7.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 7.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 7.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 7.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 6.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 6.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 6.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 6.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 6.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 6.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 6.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 6.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 5.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 5.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 5.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 5.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 5.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 5.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 5.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 5.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 5.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 5.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 5.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 4.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 4.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 4.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 4.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 4.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 4.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 4.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 4.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 4.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 4.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 4.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 4.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 4.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 4.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 4.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 4.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 3.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 3.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 3.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 3.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 3.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 3.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 3.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 3.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 3.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 3.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 3.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 3.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 3.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 2.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 2.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 2.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 2.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 2.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 2.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 2.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 2.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 2.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 2.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 2.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 2.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 2.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 2.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 1.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 1.0
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Brain - Putamen (basal ganglia)
Average nTPM: 9.7
Samples: 205

Max nTPM: 32.1
Min nTPM: 0.9
Std nTPM: 5.9
Median nTPM: 9.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 32.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 25.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 23.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 23.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 22.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 22.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 21.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 21.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 21.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 20.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 20.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 20.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 20.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 20.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 19.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 19.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 19.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 19.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 19.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 19.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 18.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 18.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 18.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 18.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 18.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 17.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 17.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 17.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 17.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 16.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 16.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 16.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 15.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 15.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 15.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 15.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 15.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 15.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 15.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 15.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 14.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 14.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 14.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 14.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 14.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 14.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 14.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 14.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 14.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 14.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 14.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 13.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 12.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 12.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 12.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 12.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 12.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 12.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 12.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 12.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 12.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 12.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 12.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 12.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 11.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 11.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 11.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 11.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 11.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 11.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 11.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 11.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 11.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 11.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 10.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 10.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 10.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 10.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 10.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 10.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 10.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 10.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 10.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 10.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 10.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 10.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 10.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 10.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 9.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 9.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 9.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 9.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 9.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 9.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 9.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 9.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 9.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 9.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 9.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 9.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 9.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 9.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 9.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 9.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 9.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 8.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 8.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 8.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 8.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 8.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 8.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 8.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 8.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 8.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 8.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 8.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 8.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 8.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 8.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 8.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 7.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 7.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 7.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 7.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 7.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 7.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 7.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 6.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 6.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 6.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 6.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 6.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 6.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 6.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 5.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 5.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 5.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 5.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 5.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 5.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 5.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 5.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 5.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 5.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 5.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 5.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 5.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 5.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 5.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 4.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 4.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 4.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 4.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 4.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 4.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 4.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 4.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 4.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 4.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 4.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 4.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 4.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 4.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 4.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 4.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 4.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 4.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 3.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 3.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 3.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 3.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 3.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 3.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 3.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 3.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 3.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 3.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 2.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 2.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 2.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 2.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 2.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 2.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 2.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 2.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 2.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 2.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 2.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 2.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 2.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 2.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 2.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 2.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 2.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 2.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 2.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 2.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 1.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 1.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 0.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

30.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 30.4
FF:10164-103B2 76 years, female 30.4
Nucleus accumbens
Scaled Tags Per Million: 18.3
FF:10037-101F1 23-56 years, mixed 18.3
Putamen
Scaled Tags Per Million: 28.3
FF:10176-103C5 60 years, female 28.3
Globus pallidus
Scaled Tags Per Million: 13.1
FF:10175-103C4 60 years, female 19.6
FF:10161-103A8 76 years, female 6.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

79.2
Pig sample Sample description nTPM
Caudate
nTPM: 79.2
Samples: 4

Max nTPM: 89.4
Min nTPM: 67.5
Sample A Female 85.4
Sample B Female 67.5
Sample C Male 89.4
Sample D Male 74.5
Putamen
nTPM: 61.5
Samples: 4

Max nTPM: 94.3
Min nTPM: 42.4
Sample A Female 42.4
Sample B Female 43.8
Sample C Male 94.3
Sample D Male 65.5
Septum
nTPM: 54.2
Samples: 4

Max nTPM: 63.2
Min nTPM: 44.7
Sample A Female 63.2
Sample B Female 51.5
Sample C Male 57.3
Sample D Male 44.7
Ventral pallidum
nTPM: 66.1
Samples: 4

Max nTPM: 73.2
Min nTPM: 52.3
Sample A Female 70.1
Sample B Female 52.3
Sample C Male 73.2
Sample D Male 68.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

139.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 139.4
Samples: 4

Max nTPM: 148.5
Min nTPM: 130.2
Sample A Male 148.5
Sample B Male 139.2
Sample C Female 130.2
Sample D Female 139.8
Septum
nTPM: 77.6
Samples: 4

Max nTPM: 89.0
Min nTPM: 70.5
Sample A Male 72.5
Sample B Male 89.0
Sample C Female 70.5
Sample D Female 78.2
Ventral forebrain
nTPM: 103.3
Samples: 4

Max nTPM: 106.7
Min nTPM: 98.7
Sample A Male 98.7
Sample B Male 105.9
Sample C Female 106.7
Sample D Female 101.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.2
69735861 Antisense, RP_050503_03_F10, Mouse strain C57BL/6J (56 days, male) 1.2
Pallidum
Expression energy: 0.7
69735861 Antisense, RP_050503_03_F10, Mouse strain C57BL/6J (56 days, male) 0.7

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