We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
47.5
nTPM
GTEx:
47.5
nTPM
FANTOM5:
23.9
Scaled Tags Per Million
Pig:
54.0
nTPM
Mouse:
27.5
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
47.5
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 47.5
Samples: 105
Max nTPM: 116.3
Min nTPM: 22.5
Std nTPM: 12.9
Median nTPM:
218_1
71 years, female
116.3
379_1
60 years, male
83.4
386_1
76 years, male
76.2
237_1
82 years, male
72.3
375_1
74 years, female
71.6
307_1
66 years, female
70.6
447_1
81 years, male
66.9
308_1
70 years, female
66.4
145_1
84 years, male
62.4
353_1
82 years, female
61.8
311_1
78 years, male
61.5
41_1
94 years, female
60.9
6_1
73 years, female
60.5
35_1
74 years, female
59.9
246_1
77 years, male
59.2
173_1
67 years, male
59.0
452_1
88 years, female
58.4
163_1
78 years, male
56.9
355_1
70 years, female
56.7
322_1
76 years, male
56.6
43_1
64 years, female
56.2
335_1
73 years, female
55.9
384_1
83 years, male
55.7
177_1
74 years, male
55.5
120_1
70 years, female
55.3
350_1
84 years, female
54.6
495_1
57 years, female
52.6
425_1
59 years, female
52.3
243_1
75 years, male
51.9
526_1
61 years, male
51.7
351_1
91 years, male
51.2
115_1
83 years, male
50.6
117_1
61 years, male
50.4
189_1
76 years, male
50.3
266_1
85 years, male
49.7
349_1
83 years, male
49.7
377_1
82 years, female
49.3
347_1
72 years, male
49.2
4_1
88 years, female
49.1
499_1
55 years, female
49.1
265_1
87 years, male
48.1
389_1
86 years, female
47.3
404_1
82 years, female
47.2
319_1
81 years, male
47.0
317_1
60 years, male
46.8
137_1
83 years, male
46.7
295_1
61 years, female
46.7
153_1
70 years, female
46.3
354_1
81 years, female
46.1
405_1
91 years, male
45.9
320_1
89 years, female
45.8
313_1
79 years, female
45.7
356_1
87 years, female
45.7
468_1
89 years, male
45.5
109_1
81 years, female
45.2
42_1
85 years, male
45.0
414_1
84 years, female
44.7
324_1
76 years, male
44.6
318_1
68 years, male
44.5
321_1
62 years, female
44.5
139_1
64 years, female
44.4
352_1
62 years, male
44.0
518_1
75 years, female
43.8
126_1
63 years, male
43.4
9_1
66 years, female
43.2
17_1
71 years, male
43.1
2_1
77 years, female
42.8
394_1
75 years, female
42.7
396_1
62 years, male
42.6
406_1
79 years, male
42.1
251_1
78 years, male
41.8
314_1
67 years, male
41.6
506_1
65 years, male
41.6
316_1
62 years, male
41.5
18_1
88 years, male
41.4
254_1
77 years, female
41.3
293_1
68 years, female
41.3
480_1
63 years, male
41.3
292_1
71 years, male
40.7
503_1
68 years, male
40.5
162_1
79 years, female
40.4
376_1
75 years, female
40.0
99_1
64 years, male
39.9
172_1
72 years, female
39.7
119_1
70 years, female
39.5
286_1
68 years, female
39.1
217_1
76 years, male
38.7
291_1
76 years, male
38.5
348_1
84 years, male
38.5
229_1
69 years, female
37.6
264_1
73 years, female
35.1
315_1
62 years, female
32.8
415_1
77 years, female
32.6
466_1
57 years, female
32.2
517_1
88 years, male
31.7
491_1
89 years, female
31.4
288_1
66 years, female
31.3
32_1
67 years, male
31.0
142_1
61 years, female
30.6
81_1
67 years, male
30.0
490_1
67 years, female
29.7
413_1
59 years, female
27.7
501_1
88 years, male
27.3
149_1
88 years, male
26.8
89_1
63 years, male
22.5
Show allShow less
RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
