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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:37.5 nTPM
HPA Brain:45.6 nTPM
GTEx:37.5 nTPM
FANTOM5:19.9 Scaled Tags Per Million
Pig:21.9 nTPM
Mouse:27.9 nTPM
Allen mouse:1.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA018479
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

45.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 26.8
2481 Female, age 94, left hemisphere 35.7
1854 Male, age 80, left hemisphere 29.0
2288 Male, age 75, left hemisphere 28.2
1781 Male, age 74, unknown 26.7
2846 Female, age 79, unknown 25.7
2289 Male, age 61, right hemisphere 25.5
1857 Female, age 85, left hemisphere 24.2
2290 Female, age 72, unknown 19.1
Globus pallidus, externus
nTPM: 43.3
1996 Male, age 80, right hemisphere 50.7
2567 Female, age 72, unknown 43.5
2646 Male, age 61, right hemisphere 40.9
2772 Female, age 79, unknown 40.9
2395 Male, age 75, both hemispheres 40.3
Globus pallidus, internus
nTPM: 45.6
2111 Female, age 85, right hemisphere 50.5
1818 Male, age 74, unknown 49.1
2566 Female, age 72, unknown 48.5
2037 Male, age 80, right hemisphere 45.3
2778 Female, age 91, both hemispheres 44.3
2483 Female, age 94, right hemisphere 42.3
2287 Male, age 75, right hemisphere 39.4
Nucleus accumbens
nTPM: 27.5
2391 Female, age 94, left hemisphere 39.8
2698 Female, age 72, unknown 33.9
2732 Male, age 80, right hemisphere 32.3
1806 Female, age 85, left hemisphere 25.9
2286 Male, age 75, left hemisphere 25.9
1856 Female, age 91, right hemisphere 23.1
1783 Male, age 74, unknown 21.8
2824 Male, age 61, right hemisphere 16.9
Nucleus basalis of Meynert
nTPM: 33.8
2569 Male, age 61, both hemispheres 43.0
2821 Male, age 75, both hemispheres 35.1
2393 Male, age 80, right hemisphere 30.0
2484 Female, age 94, left hemisphere 27.1
Nucleus of the diagonal band
nTPM: 21.2
1812 Female, age 91, both hemispheres 25.1
1979 Male, age 74, unknown 24.7
2775 Male, age 80, right hemisphere 22.0
2195 Female, age 85, both hemispheres 19.6
2029 Male, age 61, right hemisphere 14.7
Putamen
nTPM: 27.0
2482 Female, age 94, left hemisphere 39.8
2489 Female, age 72, unknown 30.5
2647 Male, age 75, left hemisphere 29.3
1829 Male, age 74, unknown 25.0
1838 Male, age 80, right hemisphere 22.5
1937 Female, age 91, right hemisphere 22.0
2466 Female, age 79, unknown 19.9
Septal nuclei
nTPM: 24.4
2199 Male, age 80, right hemisphere 36.0
2629 Female, age 94, right hemisphere 27.8
2394 Male, age 61, left hemisphere 26.8
2059 Female, age 85, both hemispheres 23.3
2009 Female, age 91, both hemispheres 19.7
1960 Male, age 74, unknown 18.9
2031 Female, age 72, unknown 18.4
Stria terminalis, bed nucleus
nTPM: 20.1
2201 Male, age 74, unknown 23.2
1974 Female, age 91, both hemispheres 21.3
2486 Female, age 94, both hemispheres 15.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

37.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 33.5
Samples: 246

Max nTPM: 66.1
Min nTPM: 15.4
Std nTPM: 8.9
Median nTPM: 33.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 66.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 64.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 56.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 55.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 54.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 53.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 51.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 50.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 49.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 49.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 49.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 49.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 49.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 48.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 48.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 48.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 47.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 47.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 47.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 47.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 47.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 47.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 47.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 46.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 46.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 45.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 45.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 44.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 44.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 44.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 44.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 44.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 44.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 43.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 43.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 43.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 42.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 42.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 41.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 41.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 41.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 41.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 41.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 41.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 41.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 41.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 41.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 41.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 40.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 40.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 40.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 40.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 40.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 40.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 39.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 39.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 39.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 39.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 39.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 39.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 39.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 39.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 39.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 39.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 39.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 38.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 38.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 38.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 38.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 38.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 38.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 38.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 38.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 38.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 38.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 37.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 37.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 37.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 37.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 37.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 37.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 37.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 37.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 37.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 36.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 36.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 36.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 36.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 36.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 36.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 36.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 36.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 35.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 35.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 35.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 35.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 35.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 35.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 35.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 35.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 35.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 35.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 34.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 34.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 34.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 34.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 34.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 34.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 33.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 33.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 33.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 33.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 33.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 33.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 33.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 33.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 33.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 33.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 33.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 33.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 33.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 33.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 33.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 33.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 33.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 32.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 32.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 32.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 32.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 32.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 32.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 32.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 32.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 32.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 32.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 31.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 31.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 31.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 30.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 30.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 30.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 30.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 30.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 30.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 30.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 30.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 30.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 30.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 29.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 29.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 29.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 29.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 29.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 29.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 29.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 29.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 29.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 29.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 29.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 28.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 28.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 28.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 28.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 28.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 28.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 28.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 28.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 28.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 28.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 28.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 27.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 27.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 27.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 27.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 27.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 27.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 27.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 27.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 27.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 27.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 26.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 26.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 26.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 26.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 26.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 26.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 26.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 26.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 26.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 25.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 25.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 25.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 25.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 25.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 25.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 25.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 25.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 24.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 24.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 24.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 24.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 24.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 24.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 24.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 24.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 24.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 24.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 24.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 24.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 24.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 24.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 23.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 23.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 23.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 23.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 23.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 23.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 23.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 23.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 23.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 22.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 22.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 22.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 22.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 22.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 22.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 22.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 22.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 22.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 21.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 21.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 21.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 21.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 21.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 21.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 20.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 20.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 20.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 20.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 20.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 19.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 19.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 19.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 18.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 17.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 15.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 30.1
Samples: 246

Max nTPM: 77.2
Min nTPM: 16.2
Std nTPM: 10.4
Median nTPM: 27.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 77.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 63.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 62.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 62.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 61.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 60.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 60.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 56.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 54.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 53.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 53.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 50.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 49.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 48.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 48.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 47.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 47.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 46.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 46.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 45.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 44.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 44.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 44.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 44.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 43.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 43.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 43.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 43.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 43.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 42.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 42.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 42.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 42.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 41.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 41.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 41.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 41.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 40.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 40.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 40.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 40.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 40.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 39.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 39.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 38.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 38.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 38.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 38.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 37.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 37.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 37.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 37.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 37.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 36.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 36.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 36.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 36.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 36.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 36.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 35.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 35.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 35.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 35.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 35.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 34.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 34.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 34.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 34.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 34.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 34.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 34.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 33.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 33.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 33.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 33.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 33.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 33.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 32.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 32.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 32.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 32.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 32.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 32.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 32.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 31.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 31.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 31.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 31.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 31.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 31.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 31.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 31.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 31.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 30.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 30.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 30.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 30.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 30.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 30.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 29.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 29.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 29.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 29.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 29.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 29.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 29.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 29.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 29.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 28.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 28.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 28.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 28.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 28.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 28.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 28.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 28.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 27.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 27.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 27.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 27.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 27.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 27.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 27.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 27.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 27.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 26.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 26.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 26.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 26.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 26.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 26.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 26.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 26.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 26.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 26.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 26.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 25.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 25.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 25.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 25.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 25.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 25.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 25.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 25.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 25.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 25.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 25.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 25.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 25.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 24.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 24.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 24.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 24.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 24.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 24.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 24.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 24.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 24.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 24.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 23.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 23.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 23.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 23.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 23.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 23.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 23.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 23.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 23.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 23.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 23.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 23.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 23.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 23.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 23.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 23.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 23.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 23.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 23.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 23.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 23.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 22.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 22.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 22.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 22.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 22.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 22.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 22.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 22.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 22.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 21.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 21.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 21.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 21.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 21.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 21.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 21.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 21.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 21.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 21.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 20.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 20.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 20.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 20.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 20.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 20.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 20.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 20.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 20.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 20.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 20.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 20.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 20.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 20.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 20.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 20.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 20.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 20.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 20.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 20.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 19.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 19.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 19.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 19.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 19.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 19.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 19.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 19.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 19.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 18.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 18.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 18.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 18.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 18.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 18.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 18.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 18.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 17.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 17.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 17.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 17.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 16.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 16.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 16.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 16.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 16.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 16.2
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 37.5
Samples: 205

Max nTPM: 87.0
Min nTPM: 18.1
Std nTPM: 10.9
Median nTPM: 35.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 87.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 83.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 65.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 62.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 61.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 59.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 58.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 58.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 57.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 56.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 56.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 56.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 55.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 55.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 55.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 55.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 54.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 53.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 53.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 53.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 53.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 52.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 51.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 51.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 50.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 49.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 49.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 49.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 48.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 48.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 48.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 47.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 47.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 47.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 47.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 47.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 47.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 46.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 46.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 45.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 45.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 45.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 44.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 44.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 44.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 44.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 44.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 43.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 43.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 43.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 43.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 43.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 43.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 43.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 43.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 42.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 42.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 42.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 42.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 42.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 41.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 41.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 41.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 41.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 41.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 41.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 41.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 41.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 41.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 41.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 41.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 41.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 41.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 40.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 40.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 40.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 40.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 39.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 39.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 39.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 39.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 39.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 39.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 38.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 38.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 38.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 38.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 38.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 38.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 37.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 37.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 37.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 36.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 36.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 36.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 36.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 36.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 36.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 35.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 35.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 35.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 35.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 35.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 35.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 35.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 35.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 35.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 35.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 35.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 35.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 34.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 34.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 34.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 34.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 34.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 34.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 34.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 34.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 34.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 33.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 33.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 33.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 33.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 33.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 33.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 33.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 32.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 32.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 32.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 32.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 32.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 32.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 31.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 31.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 31.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 31.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 31.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 31.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 31.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 31.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 31.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 31.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 31.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 31.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 30.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 30.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 30.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 30.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 30.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 30.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 30.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 30.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 30.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 29.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 29.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 29.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 29.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 28.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 28.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 28.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 28.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 28.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 28.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 28.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 27.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 27.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 27.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 27.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 27.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 27.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 27.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 27.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 26.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 26.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 25.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 25.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 25.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 25.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 25.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 25.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 25.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 25.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 25.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 25.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 24.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 24.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 24.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 24.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 24.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 23.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 23.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 23.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 23.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 23.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 23.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 23.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 22.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 22.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 22.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 21.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 21.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 20.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 20.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 20.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 18.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

19.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 18.0
FF:10164-103B2 76 years, female 18.0
Nucleus accumbens
Scaled Tags Per Million: 15.8
FF:10037-101F1 23-56 years, mixed 15.8
Putamen
Scaled Tags Per Million: 17.6
FF:10176-103C5 60 years, female 17.6
Globus pallidus
Scaled Tags Per Million: 19.9
FF:10161-103A8 76 years, female 25.8
FF:10175-103C4 60 years, female 14.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21.9
Pig sample Sample description nTPM
Caudate
nTPM: 18.0
Samples: 4

Max nTPM: 19.3
Min nTPM: 16.4
Sample A Female 19.3
Sample B Female 19.1
Sample C Male 16.4
Sample D Male 17.2
Putamen
nTPM: 21.9
Samples: 4

Max nTPM: 27.0
Min nTPM: 18.9
Sample A Female 27.0
Sample B Female 18.9
Sample C Male 21.4
Sample D Male 20.3
Septum
nTPM: 20.1
Samples: 4

Max nTPM: 21.1
Min nTPM: 19.6
Sample A Female 21.1
Sample B Female 19.6
Sample C Male 19.9
Sample D Male 19.6
Ventral pallidum
nTPM: 19.6
Samples: 4

Max nTPM: 20.7
Min nTPM: 18.5
Sample A Female 18.5
Sample B Female 20.6
Sample C Male 18.7
Sample D Male 20.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

27.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 27.9
Samples: 4

Max nTPM: 30.6
Min nTPM: 24.3
Sample A Male 27.3
Sample B Male 24.3
Sample C Female 29.4
Sample D Female 30.6
Septum
nTPM: 24.0
Samples: 4

Max nTPM: 26.5
Min nTPM: 22.5
Sample A Male 22.5
Sample B Male 26.5
Sample C Female 23.3
Sample D Female 23.6
Ventral forebrain
nTPM: 25.8
Samples: 4

Max nTPM: 27.6
Min nTPM: 24.2
Sample A Male 24.2
Sample B Male 25.5
Sample C Female 27.6
Sample D Female 25.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.8
75694367 Antisense, RP_060518_03_F08, Mouse strain C57BL/6J (56 days, male) 1.8
Pallidum
Expression energy: 1.4
75694367 Antisense, RP_060518_03_F08, Mouse strain C57BL/6J (56 days, male) 1.4

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