HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:41.3 nTPM
HPA Brain:93.6 nTPM
GTEx:41.3 nTPM
FANTOM5:104.2 Scaled Tags Per Million
Pig:96.2 nTPM
Mouse:104.9 nTPM
Allen mouse:14.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006148Antibody HPA062857Antibody CAB017441
Glial cells MediumMediumMedium
Neuronal cells MediumMediumMedium






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 93.6
Sample id Sample description nTPM
Hippocampus
nTPM: 81.5
2529 Female, age 94, left hemisphere 106.6
1855 Male, age 76, left hemisphere 82.3
1898 Male, age 80, left hemisphere 78.0
2621 Female, age 67, right hemisphere 77.2
2148 Female, age 91, left hemisphere 76.6
1911 Female, age 85, right hemisphere 68.4
Dentate gyrus
nTPM: 89.2
2010 Male, age 76, both hemispheres 124.9
2530 Female, age 94, left hemisphere 89.8
1927 Female, age 91, both hemispheres 85.1
2528 Male, age 74, both hemispheres 84.9
2531 Female, age 67, both hemispheres 76.1
2246 Female, age 85, both hemispheres 74.1
Entorhinal gyrus
nTPM: 75.2
1787 Male, age 76, left hemisphere 82.4
2117 Female, age 91, right hemisphere 79.2
2764 Male, age 80, right hemisphere 77.1
1938 Female, age 85, left hemisphere 76.2
2686 Male, age 75, right hemisphere 71.3
2613 Female, age 94, left hemisphere 64.7
Hippocampus, CA1
nTPM: 93.6
2045 Male, age 76, both hemispheres 154.1
2749 Male, age 80, left hemisphere 82.2
2527 Male, age 74, both hemispheres 78.5
1873 Female, age 85, both hemispheres 76.5
2082 Female, age 91, right hemisphere 76.5
Hippocampus, CA2
nTPM: 87.5
1892 Male, age 76, both hemispheres 125.4
2249 Male, age 74, both hemispheres 89.0
2437 Female, age 94, left hemisphere 87.9
1963 Male, age 80, left hemisphere 82.8
2113 Female, age 91, right hemisphere 73.8
1940 Female, age 85, left hemisphere 66.1
Hippocampus, CA3
nTPM: 81.8
1867 Male, age 76, both hemispheres 116.8
2436 Male, age 74, both hemispheres 88.9
2620 Female, age 94, left hemisphere 78.0
1891 Female, age 85, both hemispheres 71.4
2137 Male, age 80, left hemisphere 68.7
2861 Female, age 67, both hemispheres 67.2
Parahippocampal cortex
nTPM: 84.3
2018 Male, age 76, both hemispheres 128.4
1990 Female, age 91, right hemisphere 85.8
1850 Male, age 80, both hemispheres 85.2
2532 Female, age 72, left hemisphere 83.2
2250 Female, age 67, right hemisphere 83.0
1933 Female, age 85, both hemispheres 81.4
2245 Female, age 91, both hemispheres 77.7
2692 Male, age 74, both hemispheres 76.1
2622 Female, age 67, right hemisphere 72.2
2693 Female, age 94, both hemispheres 69.5
Perirhinal gyrus
nTPM: 85.4
2848 Male, age 76, right hemisphere 112.7
1841 Female, age 85, right hemisphere 84.2
1847 Female, age 91, left hemisphere 81.0
1794 Male, age 80, right hemisphere 75.0
2521 Female, age 94, right hemisphere 73.8
Subiculum
nTPM: 89.9
2042 Male, age 76, both hemispheres 131.2
2438 Female, age 94, left hemisphere 91.0
2619 Male, age 74, both hemispheres 84.3
1901 Male, age 80, both hemispheres 80.4
1977 Female, age 85, both hemispheres 77.6
2729 Female, age 91, right hemisphere 75.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 41.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.3
Samples: 255

Max nTPM: 438.8
Min nTPM: 15.2
Std nTPM: 35.0
Median nTPM: 33.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 438.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 263.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 174.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 125.9
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 119.2
GTEX-13PVQ-0011-R1b-SM-GJ3RQ 50-59 years, male 114.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 113.7
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 112.1
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 111.3
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 106.9
GTEX-ZYFD-0011-R1b-SM-GRR1T 50-59 years, male 98.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 104.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 104.2
FF:10153-102I9 76 years, female 132.5
FF:10169-103B7 60 years, female 75.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 96.2
Pig sample Sample description nTPM
Subiculum
nTPM: 69.6
Samples: 4

Max nTPM: 91.8
Min nTPM: 60.1
Sample A Female 91.8
Sample B Female 60.1
Sample C Male 65.1
Sample D Male 61.2
Dorsal hippocampus
nTPM: 96.2
Samples: 4

Max nTPM: 118.7
Min nTPM: 82.4
Sample A Female 118.7
Sample B Female 95.8
Sample C Male 82.4
Sample D Male 87.9
Entorhinal cortex
nTPM: 78.5
Samples: 4

Max nTPM: 92.4
Min nTPM: 67.1
Sample A Female 85.4
Sample B Female 92.4
Sample C Male 67.1
Sample D Male 69.0
Ventral hippocampus
nTPM: 89.7
Samples: 4

Max nTPM: 104.9
Min nTPM: 64.0
Sample A Female 87.6
Sample B Female 64.0
Sample C Male 102.1
Sample D Male 104.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 104.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 98.7
Samples: 4

Max nTPM: 102.4
Min nTPM: 95.1
Sample A Male 97.1
Sample B Male 100.3
Sample C Female 102.4
Sample D Female 95.1
Hippocampal formation
nTPM: 104.9
Samples: 4

Max nTPM: 112.5
Min nTPM: 95.3
Sample A Male 103.6
Sample B Male 95.3
Sample C Female 112.5
Sample D Female 108.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 14.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.7
67978476 Antisense, RP_040923_01_C01, Mouse strain C57BL/6J (56 days, male) 14.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

contact@proteinatlas.org