PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:115.5 nTPM
FANTOM5:146.9 Scaled Tags Per Million
Pig:144.0 nTPM
Mouse:679.4 nTPM
Allen mouse:10.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 115.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 81.0
1984 Male, age 76, both hemispheres 97.5
2090 Male, age 80, both hemispheres 83.3
2188 Female, age 91, both hemispheres 80.0
2301 Female, age 85, both hemispheres 63.2
Area postrema
nTPM: 65.4
2306 Male, age 80, both hemispheres 71.8
2054 Male, age 76, both hemispheres 62.8
2799 Male, age 61, both hemispheres 61.6
Dorsal cochlear nucleus
nTPM: 87.6
2802 Male, age 74, right hemisphere 100.9
2058 Male, age 76, both hemispheres 86.8
2378 Male, age 80, both hemispheres 85.2
2187 Female, age 91, both hemispheres 84.4
2370 Male, age 61, both hemispheres 80.4
Dorsal medullary reticular nucleus
nTPM: 82.5
2040 Female, age 85, both hemispheres 110.1
2373 Male, age 61, both hemispheres 70.2
2088 Male, age 76, both hemispheres 67.3
Dorsal motor vagal complex
nTPM: 68.5
2000 Male, age 74, unknown 87.8
2133 Female, age 91, both hemispheres 83.2
2797 Male, age 61, both hemispheres 78.6
2185 Male, age 76, both hemispheres 76.2
2643 Male, age 74, both hemispheres 62.2
2844 Male, age 55, unknown 60.2
2813 Female, age 72, unknown 52.1
2807 Female, age 85, both hemispheres 47.9
Dorsal tegmental nucleus
nTPM: 82.5
2083 Male, age 80, both hemispheres 98.1
2326 Male, age 74, both hemispheres 88.1
1936 Male, age 76, left hemisphere 77.1
2358 Male, age 61, both hemispheres 67.0
Dorsolateral tegmental area
nTPM: 90.3
2654 Male, age 80, both hemispheres 107.4
2751 Female, age 85, both hemispheres 106.2
2360 Male, age 74, both hemispheres 88.0
2141 Male, age 76, both hemispheres 76.6
2337 Male, age 61, both hemispheres 73.0
Gigantocellular reticular nuclei, medullary
nTPM: 91.2
1876 Female, age 85, both hemispheres 107.8
2022 Male, age 76, right hemisphere 95.6
2462 Male, age 74, both hemispheres 95.0
2387 Female, age 91, both hemispheres 88.4
2310 Male, age 80, both hemispheres 80.9
2314 Male, age 61, both hemispheres 79.4
Gigantocellular reticular nuclei, pars
nTPM: 82.2
2168 Male, age 76, both hemispheres 108.8
2084 Female, age 85, both hemispheres 93.7
2706 Male, age 80, both hemispheres 72.9
2336 Male, age 61, both hemispheres 71.8
2330 Male, age 80, both hemispheres 64.0
Inferior olive
nTPM: 87.2
2563 Male, age 74, both hemispheres 109.1
2085 Female, age 85, both hemispheres 100.2
2379 Male, age 80, both hemispheres 80.1
2178 Male, age 61, both hemispheres 76.6
2628 Female, age 91, both hemispheres 69.9
Kolliker-Fuse nucleus
nTPM: 85.2
2163 Male, age 80, both hemispheres 96.0
2315 Male, age 76, right hemisphere 88.2
2793 Female, age 91, left hemisphere 71.3
Lateral lemniscal nuclei
nTPM: 96.9
2169 Male, age 76, both hemispheres 119.4
2036 Male, age 80, both hemispheres 118.3
2746 Female, age 85, left hemisphere 97.7
2453 Male, age 74, right hemisphere 81.7
2320 Female, age 91, left hemisphere 67.6
Lateral medullary reticular nucleus
nTPM: 91.2
2044 Male, age 76, both hemispheres 121.1
2305 Male, age 74, both hemispheres 99.0
2804 Female, age 91, both hemispheres 88.9
2852 Male, age 80, both hemispheres 82.1
2190 Female, age 85, both hemispheres 79.8
2374 Male, age 61, both hemispheres 76.2
Lateral parabrachial nucleus
nTPM: 86.9
2139 Female, age 85, right hemisphere 112.1
2013 Male, age 80, both hemispheres 103.0
2792 Male, age 76, both hemispheres 73.6
2790 Male, age 61, both hemispheres 58.7
Lateral vestibular nucleus
nTPM: 81.1
2184 Male, age 76, both hemispheres 85.6
2311 Male, age 80, both hemispheres 76.6
Locus coeruleus
nTPM: 76.1
2123 Female, age 91, both hemispheres 106.0
2317 Female, age 72, unknown 79.2
2014 Male, age 55, unknown 78.0
2162 Male, age 80, both hemispheres 70.9
2720 Male, age 74, both hemispheres 68.9
2788 Male, age 74, unknown 65.0
1980 Male, age 76, both hemispheres 64.9
Medial olivary nucleus
nTPM: 85.9
2138 Female, age 91, both hemispheres 95.8
1943 Male, age 61, both hemispheres 86.4
1962 Male, age 76, both hemispheres 83.8
2851 Male, age 80, both hemispheres 77.5
Medial parabrachial nucleus
nTPM: 83.4
2170 Female, age 91, both hemispheres 95.3
2854 Male, age 80, both hemispheres 89.6
2463 Female, age 85, right hemisphere 86.7
2786 Male, age 76, both hemispheres 75.9
2156 Male, age 61, both hemispheres 69.7
Medial periolivary nuclei
nTPM: 97.0
2063 Male, age 76, both hemispheres 124.9
2171 Female, age 85, both hemispheres 117.8
2791 Male, age 74, right hemisphere 94.5
2081 Male, age 80, both hemispheres 82.7
2458 Female, age 91, both hemispheres 65.0
Medial vestibular nucleus
nTPM: 98.6
2093 Male, age 80, both hemispheres 115.2
2803 Female, age 91, both hemispheres 107.0
2743 Female, age 85, both hemispheres 99.7
2624 Male, age 61, both hemispheres 93.4
2801 Male, age 74, both hemispheres 91.1
2134 Male, age 76, both hemispheres 85.3
Motor facial nucleus
nTPM: 89.2
2062 Male, age 76, both hemispheres 131.9
2365 Male, age 74, right hemisphere 103.5
2795 Female, age 91, both hemispheres 86.0
2126 Male, age 61, both hemispheres 79.4
2697 Female, age 85, both hemispheres 68.2
2327 Male, age 80, both hemispheres 66.2
Motor hypoglossal nucleus
nTPM: 73.7
2125 Female, age 91, both hemispheres 103.4
2132 Female, age 85, both hemispheres 86.3
2182 Male, age 80, both hemispheres 66.5
2461 Male, age 61, both hemispheres 58.0
2277 Male, age 76, both hemispheres 54.0
Motor trigeminal nucleus
nTPM: 77.7
2079 Male, age 80, both hemispheres 92.4
2560 Male, age 74, both hemispheres 81.1
2309 Male, age 76, both hemispheres 78.9
2335 Male, age 61, both hemispheres 75.9
2321 Female, age 91, both hemispheres 60.2
Nuclei of the trapezoid body
nTPM: 106.5
2159 Male, age 61, both hemispheres 132.5
1983 Male, age 76, both hemispheres 126.3
2735 Female, age 85, both hemispheres 118.0
2166 Male, age 80, both hemispheres 84.5
2368 Female, age 91, both hemispheres 71.3
Nucleus ambiguus
nTPM: 72.7
2071 Male, age 76, both hemispheres 86.6
2096 Female, age 85, both hemispheres 58.8
Nucleus cuneatus
nTPM: 79.2
2131 Male, age 76, both hemispheres 108.8
2100 Male, age 76, both hemispheres 95.3
2564 Male, age 74, both hemispheres 92.7
2376 Male, age 61, both hemispheres 86.6
2562 Male, age 61, both hemispheres 75.5
2381 Male, age 80, both hemispheres 65.3
2380 Male, age 80, both hemispheres 65.1
2808 Female, age 85, both hemispheres 63.2
2805 Female, age 91, both hemispheres 60.2
Nucleus gracilis
nTPM: 71.3
2627 Male, age 74, both hemispheres 88.5
2382 Male, age 80, both hemispheres 65.1
2299 Female, age 85, both hemispheres 60.1
Nucleus raphe magnus
nTPM: 100.4
2160 Male, age 61, both hemispheres 136.8
2051 Male, age 76, both hemispheres 104.4
2172 Female, age 85, both hemispheres 104.2
2455 Male, age 74, both hemispheres 102.6
2328 Male, age 80, both hemispheres 83.0
2459 Female, age 91, both hemispheres 71.2
Nucleus raphe obscurus
nTPM: 79.5
2845 Female, age 85, midline 91.3
2800 Male, age 61, midline 84.3
2142 Male, age 76, midline 62.8
Nucleus raphe pallidus
nTPM: 90.8
1924 Male, age 61, midline 110.9
2183 Male, age 80, midline 91.9
2145 Male, age 76, midline 69.7
Nucleus tractus solitarii
nTPM: 61.8
2144 Female, age 91, right hemisphere 88.1
2656 Male, age 76, both hemispheres 59.8
2191 Female, age 85, both hemispheres 57.0
2307 Male, age 80, both hemispheres 42.1
Paramedian reticular nucleus
nTPM: 96.4
2050 Female, age 85, both hemispheres 118.3
2057 Male, age 80, both hemispheres 98.7
2313 Male, age 61, both hemispheres 88.1
2052 Male, age 76, both hemispheres 80.7
Parvicellular reticular nuclei
nTPM: 87.7
2119 Male, age 80, both hemispheres 96.1
2095 Male, age 76, both hemispheres 95.5
2558 Male, age 74, both hemispheres 71.4
Parvicellular reticular nuclei, medullary
nTPM: 86.8
2189 Female, age 91, both hemispheres 94.5
2091 Female, age 85, both hemispheres 91.6
2181 Male, age 80, left hemisphere 74.3
Pedunculopontine tegmental nucleus
nTPM: 79.6
2334 Male, age 80, both hemispheres 84.8
1921 Female, age 85, both hemispheres 82.6
2338 Male, age 61, both hemispheres 71.5
Peritrigeminal nucleus
nTPM: 105.2
2136 Male, age 76, both hemispheres 115.5
2067 Female, age 85, both hemispheres 108.2
2179 Male, age 61, both hemispheres 92.0
Pontine nuclei
nTPM: 115.5
1863 Male, age 55, unknown 153.2
2787 Female, age 85, both hemispheres 140.2
2727 Male, age 61, right hemisphere 128.3
2109 Female, age 72, unknown 122.3
1968 Male, age 76, left hemisphere 117.9
2454 Male, age 74, left hemisphere 95.1
2319 Female, age 91, both hemispheres 85.2
2115 Male, age 80, left hemisphere 81.8
Pontine raphe nucleus
nTPM: 89.4
2122 Female, age 85, midline 105.7
2853 Male, age 76, midline 73.1
Posteroventral cochlear nucleus
nTPM: 89.3
2752 Female, age 85, both hemispheres 105.0
2341 Male, age 80, both hemispheres 92.4
2070 Male, age 76, both hemispheres 91.1
2371 Male, age 61, both hemispheres 84.1
2135 Female, age 91, both hemispheres 73.9
Prepositus hypoglossal nucleus
nTPM: 99.7
2855 Female, age 85, right hemisphere 106.4
2086 Male, age 80, both hemispheres 93.0
Principal sensory trigeminal nucleus
nTPM: 94.9
2158 Male, age 61, both hemispheres 123.3
2008 Male, age 80, left hemisphere 102.6
2324 Male, age 76, both hemispheres 81.7
2367 Female, age 91, left hemisphere 72.0
Reticular pontine nucleus, caudal
nTPM: 83.0
2092 Male, age 76, both hemispheres 106.3
2332 Male, age 80, right hemisphere 83.5
2457 Female, age 91, both hemispheres 71.5
2559 Male, age 74, both hemispheres 70.6
Reticular pontine nucleus, oral
nTPM: 92.8
2012 Female, age 85, both hemispheres 111.5
1939 Male, age 80, both hemispheres 102.4
2361 Male, age 74, both hemispheres 95.2
2167 Male, age 76, both hemispheres 86.9
2366 Female, age 91, both hemispheres 68.2
Reticulotegmental nucleus
nTPM: 80.6
2333 Male, age 80, both hemispheres 84.7
2325 Male, age 76, both hemispheres 84.3
2322 Female, age 91, both hemispheres 76.8
2452 Male, age 74, both hemispheres 76.6
Spinal trigeminal nucleus, caudal
nTPM: 82.7
2447 Male, age 76, both hemispheres 106.3
2390 Female, age 91, both hemispheres 98.6
2312 Male, age 61, both hemispheres 72.6
2308 Male, age 80, both hemispheres 69.4
2642 Male, age 74, both hemispheres 66.4
Spinal trigeminal nucleus, interpolar
nTPM: 103.2
2066 Male, age 76, right hemisphere 139.8
2625 Male, age 61, both hemispheres 109.6
2033 Male, age 80, both hemispheres 95.6
2386 Female, age 85, both hemispheres 87.3
2389 Female, age 91, both hemispheres 83.6
Spinal trigeminal nucleus, oral
nTPM: 87.8
2737 Female, age 85, both hemispheres 98.3
2164 Male, age 80, both hemispheres 86.8
1978 Male, age 76, both hemispheres 78.3
Spinal vestibular nucleus
nTPM: 92.3
2186 Female, age 91, both hemispheres 102.7
2748 Male, age 76, both hemispheres 97.4
2780 Male, age 80, both hemispheres 97.4
2806 Female, age 85, both hemispheres 97.3
2796 Male, age 61, both hemispheres 89.0
2384 Male, age 74, both hemispheres 70.2
Subcoeruleus area
nTPM: 89.6
2369 Female, age 85, left hemisphere 98.5
1958 Male, age 80, both hemispheres 95.0
2451 Male, age 74, both hemispheres 86.7
2089 Male, age 76, left hemisphere 84.7
2323 Female, age 91, left hemisphere 83.1
Superior olive
nTPM: 94.6
1875 Female, age 85, both hemispheres 121.2
2364 Male, age 74, right hemisphere 106.6
2020 Male, age 76, both hemispheres 103.6
2329 Male, age 80, right hemisphere 74.3
2561 Female, age 91, both hemispheres 67.3
Superior vestibular nucleus
nTPM: 96.8
2383 Male, age 74, both hemispheres 107.6
2015 Male, age 80, both hemispheres 97.5
2061 Male, age 76, both hemispheres 85.1
Ventral medullary reticular nucleus
nTPM: 77.6
2372 Male, age 61, both hemispheres 78.0
2060 Male, age 76, both hemispheres 77.3
Ventral periolivary nuclei
nTPM: 94.9
2023 Male, age 76, both hemispheres 102.4
2165 Male, age 80, both hemispheres 102.2
2130 Female, age 85, both hemispheres 101.1
2794 Female, age 91, left hemisphere 74.1
Ventrolateral medulla, A1-C1 cell groups
nTPM: 97.2
1986 Male, age 76, both hemispheres 114.9
2741 Female, age 85, both hemispheres 108.7
2302 Female, age 91, both hemispheres 90.4
2118 Male, age 80, both hemispheres 90.1
2180 Male, age 61, both hemispheres 81.9
Ventrolateral tegmental area, A5 NE cell group
nTPM: 84.8
1959 Male, age 76, both hemispheres 98.3
2840 Female, age 85, both hemispheres 97.2
2161 Male, age 80, both hemispheres 89.8
2449 Male, age 74, both hemispheres 89.4
2456 Female, age 91, both hemispheres 74.9
2359 Male, age 61, both hemispheres 59.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 146.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 146.9
FF:10182-103D2 60 years, female 185.3
FF:10165-103B3 76 years, female 108.4
Medulla oblongata
Scaled Tags Per Million: 117.3
FF:10174-103C3 60 years, female 140.8
FF:10038-101F2 18-64 years, mixed 109.8
FF:10155-103A2 76 years, female 101.3
Pons
Scaled Tags Per Million: 136.6
FF:10033-101E6 18-54 years, mixed 136.6

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 144.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 129.7
Samples: 4

Max nTPM: 144.6
Min nTPM: 109.0
Sample A Female 124.4
Sample B Female 144.6
Sample C Male 140.8
Sample D Male 109.0
Pons
nTPM: 144.0
Samples: 4

Max nTPM: 180.7
Min nTPM: 109.1
Sample A Female 166.9
Sample B Female 109.1
Sample C Male 119.2
Sample D Male 180.7

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 679.4
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 679.4
Samples: 4

Max nTPM: 711.1
Min nTPM: 655.7
Sample A Male 655.7
Sample B Male 656.9
Sample C Female 694.0
Sample D Female 711.1

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 10.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 10.5
2592 Antisense, RP_040507_01_D05, Mouse strain C57BL/6J (56 days, male) 10.5
2591 Antisense, RP_040507_01_D05, Mouse strain C57BL/6J (56 days, male) 8.4
Pons
Expression energy: 9.8
2592 Antisense, RP_040507_01_D05, Mouse strain C57BL/6J (56 days, male) 9.8
2591 Antisense, RP_040507_01_D05, Mouse strain C57BL/6J (56 days, male) 9.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org