We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
SLC25A5
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Cell type
Category
Tau score
Cell type group
Category
Tau score
Single cell
Category
Tau score
Single cell
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Annotation
Annotation
Annotation
Tissue
Cell type
Enrichment
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • SLC25A5
TISSUE PRIMARY DATA SALIVARY GLAND Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Salivary gland
Tissue proteome
Salivary gland
Tissue methods
SALIVARY GLAND - Expression summary
Protein expression
Salivary glandi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:235.7 nTPM
HPA:235.7 nTPM
GTEx:219.9 nTPM
FANTOM5:450.3 Scaled Tags Per Million
SALIVARY GLAND - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SALIVARY GLAND - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA071684
Glandular cells Low


SALIVARY GLAND - TISSUE (MS)i

The MS-based protein data details section shows detailed information about the individual samples used for the relative protein abundance measurements.

Intensity values provides a relative protein abundance comparable between different genes and samples. All samples comes from one female donor. Median detection value represents the tissue for specificity and distribution categories. Protein detection is defined as a non-missing intensity value, and protein values are set to missing for a tissue if more than half of its replicates lacked a measurement for that protein.

Read more
Median intensity 72460899
Replicate Intensity
Salivary gland_01
72460899
Salivary gland_02
73191116
Salivary gland_03
70468532

SALIVARY GLAND - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

235.7
overview
Female, age 68
Salivary gland sample 216
nTPM: 246.8
Cell types%
Glandular cells:
45

Ductal cells:
25

Adipocytes:
5

Other cell types:
25

overview
Male, age 60
Salivary gland sample 217
nTPM: 266.8
Cell types%
Glandular cells:
55

Ductal cells:
20

Adipocytes:
5

Endothelial cells:
5

Other cell types:
15

overview
Female, age 21
Salivary gland sample 218
nTPM: 193.6
Cell types%
Glandular cells:
55

Ductal cells:
15

Adipocytes:
5

Endothelial cells:
5

Other cell types:
20


SALIVARY GLAND - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

219.9
GTEx sample id Sample description nTPM
Minor Salivary Gland
Average nTPM: 219.9
Samples: 181

Max nTPM: 846.3
Min nTPM: 69.2
Std nTPM: 111.2
Median nTPM: 194.5
GTEX-ZLFU-2226-SM-EXUS7 40-49 years, male 846.3
GTEX-ZF29-2126-SM-DNZYX 60-69 years, female 753.8
GTEX-12BJ1-2226-SM-5BC6G 60-69 years, male 714.5
GTEX-ZLWG-2026-SM-DO11F 50-59 years, female 619.2
GTEX-Y5LM-1826-SM-4VDT9 40-49 years, female 586.8
GTEX-1O97I-2826-SM-HPAEO 60-69 years, male 523.8
GTEX-ZT9W-2126-SM-51MSF 50-59 years, male 495.1
GTEX-11EMC-2526-SM-5PNVU 60-69 years, female 490.0
GTEX-1B97J-2126-SM-79OL6 50-59 years, female 437.1
GTEX-1HCU7-0126-SM-C1YR3 50-59 years, male 416.3
GTEX-ZPU1-2326-SM-57WEP 40-49 years, male 411.4
GTEX-1192X-2926-SM-5N9BA 50-59 years, male 389.9
GTEX-11ZTS-3026-SM-5EQM7 60-69 years, female 370.2
GTEX-131XH-2626-SM-5GCNP 50-59 years, male 361.0
GTEX-ZP4G-1926-SM-57WDZ 20-29 years, female 359.6
GTEX-1CB4I-2526-SM-7MKG1 50-59 years, male 336.4
GTEX-ZAB5-2326-SM-5IJFR 50-59 years, male 325.8
GTEX-17MFQ-1626-SM-7938Z 20-29 years, male 314.8
GTEX-1RNSC-2926-SM-EV79L 60-69 years, male 312.3
GTEX-1GTWX-2526-SM-9JGHG 60-69 years, male 305.9
GTEX-1R9K4-0526-SM-E76P1 60-69 years, male 303.5
GTEX-14E1K-2626-SM-664OJ 50-59 years, male 303.2
GTEX-YJ8A-1826-SM-GNTAB 20-29 years, male 299.7
GTEX-13QBU-2126-SM-5KLZN 40-49 years, female 296.5
GTEX-WFJO-2026-SM-4LVM3 30-39 years, male 290.9
GTEX-1MCC2-2226-SM-EV7AJ 30-39 years, female 286.8
GTEX-1A3MV-1726-SM-72D68 30-39 years, male 283.0
GTEX-14PN4-2526-SM-686ZG 50-59 years, male 278.8
GTEX-1JN1M-2426-SM-ARU93 60-69 years, female 275.8
GTEX-15SHV-2226-SM-6M464 60-69 years, male 270.1
GTEX-1HSMP-1926-SM-GA8Z5 70-79 years, male 262.0
GTEX-XV7Q-2426-SM-4BRV8 40-49 years, female 261.3
GTEX-1LVAM-0626-SM-HPAFZ 50-59 years, female 258.7
GTEX-1S5VW-1026-SM-HK797 60-69 years, male 258.6
GTEX-1RQED-2926-SM-HPAFT 60-69 years, male 255.6
GTEX-1IDJC-1626-SM-AHZ2R 50-59 years, male 255.3
GTEX-13O21-1926-SM-5MR39 50-59 years, male 255.0
GTEX-1C6VR-0726-SM-7P8OV 60-69 years, male 253.0
GTEX-11WQK-2926-SM-5EQKT 50-59 years, male 250.4
GTEX-1R9PO-2626-SM-E6CPU 60-69 years, female 249.6
GTEX-1IKJJ-2826-SM-GA8ZM 60-69 years, male 249.4
GTEX-18A7B-2826-SM-7KFTK 70-79 years, male 248.1
GTEX-13VXT-1726-SM-5IFF5 20-29 years, female 238.5
GTEX-ZQUD-2126-SM-51MSY 30-39 years, male 236.9
GTEX-11ZTT-2226-SM-5CVLP 60-69 years, female 236.5
GTEX-1LKK1-2926-SM-EVR4Z 50-59 years, female 235.3
GTEX-1LSNL-2626-SM-EV7AT 50-59 years, male 235.0
GTEX-1S82P-0726-SM-EVR4O 60-69 years, female 233.3
GTEX-14PJN-1726-SM-69LO7 30-39 years, male 233.2
GTEX-1RAZA-0626-SM-EAZ4H 20-29 years, male 231.2
GTEX-Z9EW-1426-SM-HPAG9 40-49 years, male 230.7
GTEX-WHSB-2326-SM-4M1XK 50-59 years, male 230.4
GTEX-12WSM-1826-SM-5BC64 60-69 years, male 230.2
GTEX-1QCLZ-2526-SM-EXUST 60-69 years, female 229.8
GTEX-1C4CL-2026-SM-731EB 30-39 years, male 229.0
GTEX-146FR-1226-SM-5MR78 60-69 years, female 226.5
GTEX-1S5ZU-0926-SM-HPAEX 20-29 years, female 224.4
GTEX-1117F-3026-SM-5GZYU 60-69 years, female 224.2
GTEX-18QFQ-0626-SM-718AW 30-39 years, male 224.1
GTEX-13JVG-2926-SM-5J2N9 60-69 years, male 223.7
GTEX-1MCQQ-2226-SM-DLHC4 60-69 years, male 222.6
GTEX-18D9U-2226-SM-7KFTN 40-49 years, male 222.2
GTEX-XGQ4-2626-SM-4AT6B 50-59 years, male 221.7
GTEX-13NYC-2626-SM-5K7VN 60-69 years, male 221.6
GTEX-1GN1W-2526-SM-9JGHX 50-59 years, female 221.1
GTEX-1KANC-1326-SM-CYPT8 50-59 years, female 221.0
GTEX-1AMEY-1126-SM-72D79 30-39 years, female 220.8
GTEX-1QEPI-0626-SM-E76QE 60-69 years, female 220.5
GTEX-1IY9M-2926-SM-A96TH 60-69 years, male 216.5
GTEX-1KD5A-2226-SM-EV79U 50-59 years, male 215.9
GTEX-1POEN-2226-SM-DPRXV 30-39 years, female 215.6
GTEX-11TUW-2426-SM-5EQKB 60-69 years, male 215.5
GTEX-Y5V6-2226-SM-4VDTC 60-69 years, male 212.6
GTEX-13113-1526-SM-5EGHV 60-69 years, female 212.1
GTEX-1J8QM-1826-SM-A96TA 60-69 years, female 211.2
GTEX-1GN1V-2926-SM-9JGI3 60-69 years, male 209.6
GTEX-WH7G-2126-SM-4M1XU 40-49 years, male 208.4
GTEX-Y111-2626-SM-4TT24 50-59 years, male 205.8
GTEX-1445S-2926-SM-5O993 60-69 years, male 205.2
GTEX-1LVA9-2526-SM-EVR5H 50-59 years, male 204.3
GTEX-ZE7O-2926-SM-51MSG 50-59 years, female 203.5
GTEX-15CHC-1226-SM-686ZH 60-69 years, female 203.1
GTEX-X3Y1-1926-SM-4PQZO 40-49 years, male 202.4
GTEX-1H4P4-2026-SM-9WPNV 50-59 years, male 202.3
GTEX-11NV4-1926-SM-5N9D4 60-69 years, male 197.4
GTEX-1HSGN-0626-SM-A9G2E 40-49 years, female 197.0
GTEX-14B4R-1426-SM-5Q5CG 30-39 years, male 196.2
GTEX-1IDJD-2526-SM-C1YSA 30-39 years, male 195.6
GTEX-1J1R8-1826-SM-AHZ3B 40-49 years, male 194.9
GTEX-WYVS-2026-SM-4RGNS 40-49 years, female 194.7
GTEX-15RJE-2726-SM-6LPJ1 40-49 years, male 194.5
GTEX-WY7C-1426-SM-4OND1 50-59 years, male 194.0
GTEX-1OJC3-1026-SM-E6CQK 20-29 years, male 192.9
GTEX-15EU6-2626-SM-7KUN4 50-59 years, male 188.7
GTEX-1HFI6-2826-SM-GA91I 40-49 years, male 188.6
GTEX-111FC-2926-SM-5GZY7 60-69 years, male 187.7
GTEX-1KD4Q-2526-SM-CXZKL 40-49 years, male 185.3
GTEX-X261-2426-SM-4PQZU 50-59 years, male 185.3
GTEX-1S83E-0626-SM-E9TKC 40-49 years, male 180.9
GTEX-14PJ3-1526-SM-664O9 50-59 years, male 180.4
GTEX-11P82-0926-SM-5986X 20-29 years, male 180.2
GTEX-1IOXB-2826-SM-AHZ32 50-59 years, male 179.8
GTEX-13OVL-2926-SM-5IFG3 50-59 years, male 178.8
GTEX-ZG7Y-2426-SM-DO11H 50-59 years, male 178.8
GTEX-1R9K5-0626-SM-DPRZB 50-59 years, male 178.7
GTEX-18A67-0626-SM-7KFSL 50-59 years, male 177.7
GTEX-1NSGN-0626-SM-E9J35 50-59 years, male 177.4
GTEX-1HFI7-2426-SM-B2LXV 50-59 years, female 176.5
GTEX-WOFM-2126-SM-4M9R4 20-29 years, male 176.3
GTEX-1LH75-2726-SM-HL11E 50-59 years, female 175.6
GTEX-1B8SF-1826-SM-731DJ 60-69 years, male 175.0
GTEX-1I6K6-0626-SM-ARU7J 30-39 years, male 173.7
GTEX-1NHNU-2226-SM-GRR2I 50-59 years, male 173.4
GTEX-1GF9X-0226-SM-7P8SM 40-49 years, female 173.1
GTEX-X15G-2126-SM-4PQZR 50-59 years, female 172.7
GTEX-1HSEH-1826-SM-A96SA 60-69 years, male 172.5
GTEX-1I4MK-1326-SM-B2LWT 50-59 years, female 172.3
GTEX-ZA64-1726-SM-5CVMF 20-29 years, male 171.9
GTEX-13111-2326-SM-5LZUQ 50-59 years, male 171.2
GTEX-YF7O-2226-SM-5CVN8 50-59 years, male 170.8
GTEX-1EH9U-2926-SM-7DHLX 60-69 years, male 169.8
GTEX-1AX9K-2126-SM-72D7K 50-59 years, male 169.0
GTEX-17KNJ-2726-SM-7KFRE 50-59 years, male 168.6
GTEX-1339X-2326-SM-5HL5B 40-49 years, male 168.4
GTEX-1QP28-2026-SM-F2I3M 50-59 years, female 168.4
GTEX-1MGNQ-1926-SM-DTX8L 40-49 years, male 166.7
GTEX-1OJC4-3126-SM-EXOJK 50-59 years, female 165.9
GTEX-YB5K-1726-SM-5IFIZ 40-49 years, female 165.1
GTEX-1I6K7-0926-SM-A96SV 40-49 years, male 164.8
GTEX-1GMR2-2026-SM-7MKHK 50-59 years, male 163.6
GTEX-11P81-2026-SM-5P9GT 30-39 years, female 161.3
GTEX-1PDJ9-2126-SM-HPAFH 20-29 years, male 161.1
GTEX-1314G-2026-SM-5LZUM 30-39 years, male 161.0
GTEX-1B8KZ-1726-SM-73KV7 50-59 years, male 160.4
GTEX-1LBAC-0626-SM-D3L9T 20-29 years, male 160.4
GTEX-13OVK-1826-SM-6PALE 40-49 years, male 160.3
GTEX-1HR9M-2526-SM-A9G3J 60-69 years, male 159.8
GTEX-1ICLY-0626-SM-GA915 50-59 years, male 158.9
GTEX-13G51-2426-SM-5LZY8 60-69 years, male 158.8
GTEX-13NYB-2426-SM-5IFF4 40-49 years, male 156.4
GTEX-1HSMQ-0926-SM-A96SI 50-59 years, male 155.7
GTEX-12WSL-2126-SM-5GCNG 50-59 years, male 154.8
GTEX-X5EB-1726-SM-4E3J7 40-49 years, male 153.4
GTEX-145ME-1626-SM-5RQI3 40-49 years, female 153.3
GTEX-11EQ9-2026-SM-5P9JI 30-39 years, male 152.4
GTEX-15SDE-1226-SM-HAV36 50-59 years, female 152.2
GTEX-1PIEJ-0626-SM-DTX99 20-29 years, female 151.6
GTEX-12WSN-2226-SM-5DUXT 40-49 years, male 148.8
GTEX-1I1HK-2526-SM-A96SM 60-69 years, male 148.7
GTEX-1QP9N-2026-SM-DPRZT 30-39 years, male 148.4
GTEX-1JN6P-2526-SM-CNNPX 60-69 years, male 143.9
GTEX-1LVAO-2626-SM-EVR4S 60-69 years, male 143.4
GTEX-1C64O-0626-SM-7DHL1 60-69 years, male 142.8
GTEX-13QJC-2326-SM-5Q5CD 60-69 years, female 142.7
GTEX-1GPI7-0326-SM-7MKH6 20-29 years, male 142.4
GTEX-1LC47-2426-SM-DHXKK 60-69 years, male 142.3
GTEX-1PPH8-1526-SM-E6CQO 20-29 years, male 142.1
GTEX-1H1CY-2326-SM-9OSXW 60-69 years, female 141.4
GTEX-1JKYR-0726-SM-AHZ3K 20-29 years, male 140.8
GTEX-13OVI-2326-SM-5KM47 60-69 years, female 138.5
GTEX-1QMI2-0426-SM-EWRND 60-69 years, male 133.8
GTEX-W5X1-2426-SM-HPAGA 40-49 years, female 132.9
GTEX-1AX8Z-0626-SM-731EH 60-69 years, male 132.5
GTEX-1GZ2Q-2526-SM-9KNVW 40-49 years, male 129.9
GTEX-1IE54-0826-SM-AHZ2Z 40-49 years, female 128.8
GTEX-1P4AB-2926-SM-EXOJR 50-59 years, male 127.7
GTEX-Y3I4-1926-SM-4TT8L 50-59 years, male 126.5
GTEX-131XF-2826-SM-5EGKH 60-69 years, male 125.5
GTEX-1AYD5-2726-SM-7MXVG 50-59 years, male 125.4
GTEX-ZXG5-2826-SM-5NQ8T 60-69 years, male 122.6
GTEX-178AV-1426-SM-6LLID 40-49 years, male 120.5
GTEX-13CF2-2426-SM-5LZYL 60-69 years, male 120.2
GTEX-1HGF4-2326-SM-GA91Q 60-69 years, male 120.2
GTEX-1C64N-2926-SM-79OLM 50-59 years, male 117.9
GTEX-XMK1-2626-SM-4B65R 40-49 years, male 113.2
GTEX-1IDJV-2326-SM-GA8ZL 60-69 years, male 111.0
GTEX-1J8EW-2826-SM-A96T9 60-69 years, female 107.2
GTEX-1B932-0626-SM-731EM 40-49 years, female 104.1
GTEX-1R9PM-1726-SM-E76T2 20-29 years, male 96.7
GTEX-ZC5H-2726-SM-5KLZW 40-49 years, female 92.3
GTEX-14JIY-3026-SM-6EU1R 60-69 years, male 69.2
Show allShow less

SALIVARY GLAND - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

450.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Parotid gland
Scaled Tags Per Million: 386.6
FF:10199-103F1 23 years, male 386.6
Salivary gland
Scaled Tags Per Million: 450.3
FF:10093-102C3 16-60 years, mixed 450.3
Submaxillary gland
Scaled Tags Per Million: 389.9
FF:10202-103F4 24 years, male 389.9

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo