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ARHGAP44
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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:16.5 nTPM
HPA Brain:61.0 nTPM
GTEx:16.5 nTPM
FANTOM5:58.7 Scaled Tags Per Million
Pig:61.4 nTPM
Mouse:66.4 nTPM
Allen mouse:6.4 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA038814
Glial cells Not detected
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

61.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 47.3
2288 Male, age 75, left hemisphere 65.8
2289 Male, age 61, right hemisphere 52.4
1781 Male, age 74, unknown 51.4
1857 Female, age 85, left hemisphere 47.8
2846 Female, age 79, unknown 46.7
2290 Female, age 72, unknown 44.1
1854 Male, age 80, left hemisphere 40.3
2481 Female, age 94, left hemisphere 30.1
Globus pallidus, externus
nTPM: 21.4
2772 Female, age 79, unknown 29.7
2567 Female, age 72, unknown 23.5
2646 Male, age 61, right hemisphere 21.4
1996 Male, age 80, right hemisphere 18.8
2395 Male, age 75, both hemispheres 13.7
Globus pallidus, internus
nTPM: 17.7
1818 Male, age 74, unknown 31.2
2483 Female, age 94, right hemisphere 21.8
2037 Male, age 80, right hemisphere 18.6
2566 Female, age 72, unknown 17.5
2287 Male, age 75, right hemisphere 14.4
2111 Female, age 85, right hemisphere 11.0
2778 Female, age 91, both hemispheres 9.3
Nucleus accumbens
nTPM: 45.6
1856 Female, age 91, right hemisphere 70.0
1783 Male, age 74, unknown 58.4
2824 Male, age 61, right hemisphere 50.8
1806 Female, age 85, left hemisphere 46.2
2286 Male, age 75, left hemisphere 45.6
2698 Female, age 72, unknown 42.4
2391 Female, age 94, left hemisphere 27.2
2732 Male, age 80, right hemisphere 24.5
Nucleus basalis of Meynert
nTPM: 39.1
2821 Male, age 75, both hemispheres 47.4
2484 Female, age 94, left hemisphere 44.5
2393 Male, age 80, right hemisphere 38.1
2569 Male, age 61, both hemispheres 26.2
Nucleus of the diagonal band
nTPM: 61.0
2195 Female, age 85, both hemispheres 74.9
2029 Male, age 61, right hemisphere 67.2
2775 Male, age 80, right hemisphere 63.2
1812 Female, age 91, both hemispheres 60.8
1979 Male, age 74, unknown 39.1
Putamen
nTPM: 48.9
2647 Male, age 75, left hemisphere 58.8
1838 Male, age 80, right hemisphere 54.7
1937 Female, age 91, right hemisphere 52.0
1829 Male, age 74, unknown 51.1
2466 Female, age 79, unknown 46.2
2489 Female, age 72, unknown 46.1
2482 Female, age 94, left hemisphere 33.6
Septal nuclei
nTPM: 54.9
1960 Male, age 74, unknown 70.5
2629 Female, age 94, right hemisphere 68.8
2059 Female, age 85, both hemispheres 64.0
2009 Female, age 91, both hemispheres 55.3
2031 Female, age 72, unknown 53.4
2394 Male, age 61, left hemisphere 43.1
2199 Male, age 80, right hemisphere 28.9
Stria terminalis, bed nucleus
nTPM: 60.9
1974 Female, age 91, both hemispheres 70.9
2486 Female, age 94, both hemispheres 62.9
2201 Male, age 74, unknown 48.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

16.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 12.5
Samples: 246

Max nTPM: 32.8
Min nTPM: 0.7
Std nTPM: 6.9
Median nTPM: 12.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 32.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 29.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 27.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 27.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 25.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 24.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 24.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 24.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 24.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 24.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 24.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 24.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 24.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 24.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 23.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 23.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 23.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 23.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 22.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 22.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 22.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 22.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 22.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 22.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 22.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 21.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 21.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 21.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 21.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 21.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 21.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 21.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 21.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 21.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 21.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 21.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 21.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 21.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 20.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 20.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 20.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 19.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 19.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 19.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 19.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 19.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 19.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 19.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 19.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 19.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 18.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 18.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 18.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 18.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 18.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 18.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 18.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 18.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 18.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 18.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 17.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 17.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 17.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 17.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 17.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 17.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 17.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 16.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 16.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 16.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 16.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 16.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 16.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 16.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 16.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 16.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 16.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 15.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 15.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 15.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 15.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 15.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 15.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 15.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 15.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 15.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 15.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 15.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 15.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 15.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 15.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 15.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 15.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 14.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 14.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 14.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 14.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 14.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 14.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 14.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 14.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 14.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 14.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 14.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 14.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 13.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 13.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 13.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 13.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 13.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 13.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 13.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 13.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 13.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 13.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 13.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 13.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 13.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 13.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 12.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 12.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 12.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 12.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 12.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 12.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 12.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 12.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 12.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 11.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 11.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 11.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 11.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 11.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 11.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 11.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 10.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 10.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 10.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 10.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 10.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 10.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 10.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 10.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 10.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 9.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 9.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 9.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 9.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 9.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 9.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 9.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 9.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 8.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 8.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 8.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 8.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 8.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 8.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 8.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 8.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 8.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 8.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 8.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 8.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 8.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 8.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 7.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 7.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 7.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 7.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 7.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 7.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 7.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 7.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 7.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 7.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 6.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 6.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 6.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 6.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 6.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 6.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 6.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 6.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 6.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 6.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 5.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 5.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 5.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 5.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 5.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 5.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 5.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 5.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 5.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 5.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 5.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 5.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 5.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 5.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 5.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 5.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 5.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 4.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 4.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 4.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 4.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 4.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 4.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 4.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 4.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 4.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 4.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 4.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 3.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 3.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 3.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 3.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 3.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 3.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 3.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 3.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 3.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 3.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 3.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 3.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 3.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 3.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 3.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 3.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 3.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 3.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 3.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 3.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 3.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 2.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 2.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 2.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 2.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 2.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 2.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 2.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 2.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 0.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 0.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 16.5
Samples: 246

Max nTPM: 33.3
Min nTPM: 1.5
Std nTPM: 8.0
Median nTPM: 18.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 33.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 30.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 30.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 30.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 30.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 29.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 29.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 28.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 28.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 28.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 28.3
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 28.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 28.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 27.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 27.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 27.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 27.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 27.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 27.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 27.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 26.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 26.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 26.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 26.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 26.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 25.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 25.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 25.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 25.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 25.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 25.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 25.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 25.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 25.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 25.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 24.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 24.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 24.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 24.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 24.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 24.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 24.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 24.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 23.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 23.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 23.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 23.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 23.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 23.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 23.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 23.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 23.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 23.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 23.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 23.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 23.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 23.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 23.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 23.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 22.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 22.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 22.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 22.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 22.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 22.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 22.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 22.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 22.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 22.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 22.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 22.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 22.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 22.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 22.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 22.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 21.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 21.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 21.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 21.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 21.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 21.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 21.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 21.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 21.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 21.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 21.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 21.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 21.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 21.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 21.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 20.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 20.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 20.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 20.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 20.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 20.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 20.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 20.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 20.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 20.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 20.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 20.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 20.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 20.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 19.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 19.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 19.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 19.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 19.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 19.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 19.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 19.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 19.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 19.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 19.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 19.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 18.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 18.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 18.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 18.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 18.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 18.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 18.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 18.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 18.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 17.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 17.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 17.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 17.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 17.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 17.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 17.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 17.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 17.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 17.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 17.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 16.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 16.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 16.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 16.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 16.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 16.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 16.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 16.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 15.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 15.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 15.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 15.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 15.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 15.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 15.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 15.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 15.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 14.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 14.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 14.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 14.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 14.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 14.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 14.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 14.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 14.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 13.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 13.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 13.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 13.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 13.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 12.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 12.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 12.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 12.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 12.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 11.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 11.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 11.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 10.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 10.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 10.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 10.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 10.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 9.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 9.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 9.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 9.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 9.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 9.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 9.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 8.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 8.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 8.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 8.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 8.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 8.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 7.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 7.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 7.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 7.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 7.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 7.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 6.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 6.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 6.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 6.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 6.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 6.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 5.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 5.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 5.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 5.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 5.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 5.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 5.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 4.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 4.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 4.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 4.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 4.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 4.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 4.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 3.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 3.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 3.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 3.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 3.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 3.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 3.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 3.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 3.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 3.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 3.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 3.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 3.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 3.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 3.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 3.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 2.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 2.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 2.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 2.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 2.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 2.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 2.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 2.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 2.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 2.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 1.5
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Brain - Putamen (basal ganglia)
Average nTPM: 12.1
Samples: 205

Max nTPM: 35.0
Min nTPM: 0.7
Std nTPM: 7.4
Median nTPM: 11.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 35.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 34.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 32.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 30.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 30.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 27.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 26.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 24.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 24.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 24.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 23.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 23.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 23.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 22.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 22.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 22.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 22.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 22.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 21.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 21.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 21.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 21.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 21.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 21.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 21.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 20.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 20.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 20.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 20.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 20.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 20.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 20.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 20.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 19.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 19.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 19.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 19.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 19.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 19.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 19.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 19.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 19.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 19.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 18.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 18.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 18.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 18.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 18.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 17.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 17.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 17.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 17.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 17.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 17.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 17.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 17.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 17.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 17.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 17.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 17.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 17.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 16.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 16.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 16.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 16.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 16.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 16.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 16.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 16.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 15.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 15.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 15.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 15.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 15.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 15.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 14.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 14.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 14.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 14.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 14.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 14.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 14.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 13.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 13.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 13.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 13.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 13.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 13.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 12.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 12.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 12.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 12.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 12.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 12.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 11.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 11.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 11.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 11.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 11.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 11.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 11.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 11.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 11.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 10.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 10.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 10.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 10.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 10.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 10.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 10.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 10.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 10.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 10.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 10.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 10.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 10.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 9.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 9.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 9.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 9.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 9.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 9.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 9.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 9.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 9.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 9.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 8.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 8.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 8.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 8.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 8.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 8.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 8.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 8.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 7.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 7.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 7.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 7.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 7.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 7.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 6.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 6.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 6.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 6.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 6.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 6.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 6.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 5.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 5.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 5.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 5.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 5.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 5.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 5.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 5.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 5.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 5.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 4.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 4.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 4.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 4.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 4.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 4.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 4.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 4.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 4.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 4.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 4.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 4.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 4.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 3.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 3.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 3.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 3.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 3.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 3.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 3.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 3.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 3.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 3.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 3.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 3.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 3.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 3.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 3.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 2.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 2.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 2.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 2.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 2.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 2.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 2.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 2.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 2.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 2.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 2.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 2.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 1.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 0.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 0.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 0.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

58.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 45.9
FF:10164-103B2 76 years, female 45.9
Nucleus accumbens
Scaled Tags Per Million: 58.7
FF:10037-101F1 23-56 years, mixed 58.7
Putamen
Scaled Tags Per Million: 42.9
FF:10176-103C5 60 years, female 42.9
Globus pallidus
Scaled Tags Per Million: 13.7
FF:10175-103C4 60 years, female 17.2
FF:10161-103A8 76 years, female 10.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

61.4
Pig sample Sample description nTPM
Caudate
nTPM: 61.5
Samples: 4

Max nTPM: 71.0
Min nTPM: 46.1
Sample A Female 46.1
Sample B Female 67.9
Sample C Male 71.0
Sample D Male 60.8
Putamen
nTPM: 54.9
Samples: 4

Max nTPM: 62.4
Min nTPM: 36.4
Sample A Female 36.4
Sample B Female 60.5
Sample C Male 62.4
Sample D Male 60.3
Septum
nTPM: 46.9
Samples: 4

Max nTPM: 53.2
Min nTPM: 39.1
Sample A Female 51.3
Sample B Female 53.2
Sample C Male 43.8
Sample D Male 39.1
Ventral pallidum
nTPM: 57.9
Samples: 4

Max nTPM: 73.1
Min nTPM: 48.4
Sample A Female 51.2
Sample B Female 58.7
Sample C Male 73.1
Sample D Male 48.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

66.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 39.6
Samples: 4

Max nTPM: 47.0
Min nTPM: 33.3
Sample A Male 33.3
Sample B Male 34.6
Sample C Female 47.0
Sample D Female 43.6
Septum
nTPM: 53.9
Samples: 4

Max nTPM: 59.6
Min nTPM: 50.7
Sample A Male 59.6
Sample B Male 52.0
Sample C Female 53.2
Sample D Female 50.7
Ventral forebrain
nTPM: 66.5
Samples: 4

Max nTPM: 68.3
Min nTPM: 63.7
Sample A Male 66.9
Sample B Male 63.7
Sample C Female 66.9
Sample D Female 68.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 6.2
70231074 Antisense, RP_050526_01_B06, Mouse strain C57BL/6J (56 days, male) 6.2
Pallidum
Expression energy: 6.4
70231074 Antisense, RP_050526_01_B06, Mouse strain C57BL/6J (56 days, male) 6.4

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