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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:17.2 nTPM
HPA Brain:20.0 nTPM
GTEx:17.2 nTPM
FANTOM5:61.0 Scaled Tags Per Million
Pig:16.2 nTPM
Mouse:8.8 nTPM
Allen mouse:0.4 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA030775Antibody CAB034143
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

20.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 20.0
2481 Female, age 94, left hemisphere 40.1
2288 Male, age 75, left hemisphere 21.3
2289 Male, age 61, right hemisphere 20.1
2290 Female, age 72, unknown 18.8
1781 Male, age 74, unknown 16.5
1857 Female, age 85, left hemisphere 16.5
2846 Female, age 79, unknown 15.5
1854 Male, age 80, left hemisphere 11.4
Globus pallidus, externus
nTPM: 16.2
2646 Male, age 61, right hemisphere 22.6
1996 Male, age 80, right hemisphere 19.6
2772 Female, age 79, unknown 17.4
2567 Female, age 72, unknown 12.5
2395 Male, age 75, both hemispheres 8.8
Globus pallidus, internus
nTPM: 13.7
1818 Male, age 74, unknown 19.2
2483 Female, age 94, right hemisphere 18.4
2037 Male, age 80, right hemisphere 16.3
2566 Female, age 72, unknown 12.7
2111 Female, age 85, right hemisphere 10.3
2778 Female, age 91, both hemispheres 9.6
2287 Male, age 75, right hemisphere 9.5
Nucleus accumbens
nTPM: 15.0
2391 Female, age 94, left hemisphere 22.5
2286 Male, age 75, left hemisphere 17.5
2824 Male, age 61, right hemisphere 15.0
2698 Female, age 72, unknown 14.2
1783 Male, age 74, unknown 13.3
1806 Female, age 85, left hemisphere 12.8
2732 Male, age 80, right hemisphere 12.5
1856 Female, age 91, right hemisphere 12.1
Nucleus basalis of Meynert
nTPM: 15.5
2569 Male, age 61, both hemispheres 24.4
2393 Male, age 80, right hemisphere 15.0
2484 Female, age 94, left hemisphere 12.9
2821 Male, age 75, both hemispheres 9.7
Nucleus of the diagonal band
nTPM: 15.6
1979 Male, age 74, unknown 21.4
2195 Female, age 85, both hemispheres 15.4
2775 Male, age 80, right hemisphere 15.3
1812 Female, age 91, both hemispheres 14.6
2029 Male, age 61, right hemisphere 11.5
Putamen
nTPM: 18.6
2482 Female, age 94, left hemisphere 28.1
2489 Female, age 72, unknown 21.1
2647 Male, age 75, left hemisphere 20.8
1829 Male, age 74, unknown 19.2
2466 Female, age 79, unknown 14.7
1838 Male, age 80, right hemisphere 13.3
1937 Female, age 91, right hemisphere 13.2
Septal nuclei
nTPM: 19.2
2629 Female, age 94, right hemisphere 26.2
2199 Male, age 80, right hemisphere 24.6
2059 Female, age 85, both hemispheres 22.8
2009 Female, age 91, both hemispheres 20.5
1960 Male, age 74, unknown 16.9
2031 Female, age 72, unknown 12.0
2394 Male, age 61, left hemisphere 11.1
Stria terminalis, bed nucleus
nTPM: 12.4
1974 Female, age 91, both hemispheres 13.5
2201 Male, age 74, unknown 13.2
2486 Female, age 94, both hemispheres 10.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

17.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 16.6
Samples: 246

Max nTPM: 52.7
Min nTPM: 2.6
Std nTPM: 7.0
Median nTPM: 15.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 52.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 39.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 39.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 36.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 33.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 33.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 33.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 31.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 31.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 31.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 30.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 29.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 28.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 28.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 28.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 27.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 27.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 27.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 27.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 25.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 25.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 25.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 25.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 25.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 25.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 25.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 25.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 24.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 24.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 24.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 24.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 24.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 23.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 23.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 23.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 23.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 23.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 23.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 23.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 22.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 22.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 22.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 22.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 22.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 22.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 22.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 21.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 21.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 21.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 21.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 21.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 21.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 21.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 21.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 21.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 21.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 20.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 20.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 20.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 20.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 20.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 20.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 20.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 20.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 20.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 20.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 20.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 20.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 20.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 20.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 20.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 20.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 20.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 19.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 19.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 19.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 19.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 19.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 19.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 19.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 19.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 18.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 18.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 18.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 18.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 18.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 18.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 18.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 18.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 18.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 18.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 17.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 17.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 17.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 17.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 17.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 17.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 17.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 17.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 17.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 17.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 16.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 16.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 16.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 16.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 16.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 16.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 16.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 16.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 16.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 16.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 16.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 16.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 16.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 16.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 16.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 16.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 16.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 16.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 16.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 16.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 16.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 16.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 15.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 15.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 15.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 15.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 15.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 15.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 15.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 15.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 15.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 15.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 15.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 15.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 15.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 15.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 15.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 14.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 14.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 14.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 14.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 14.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 14.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 14.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 14.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 14.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 14.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 14.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 13.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 13.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 13.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 13.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 13.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 13.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 13.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 13.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 13.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 13.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 13.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 12.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 12.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 12.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 12.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 12.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 12.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 12.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 12.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 12.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 12.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 12.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 12.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 12.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 12.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 12.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 12.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 12.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 12.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 12.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 12.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 11.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 11.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 11.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 11.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 11.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 11.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 11.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 11.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 11.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 11.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 11.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 11.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 11.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 11.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 11.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 11.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 10.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 10.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 10.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 10.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 10.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 10.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 10.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 10.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 10.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 10.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 10.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 10.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 10.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 10.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 10.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 9.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 9.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 9.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 9.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 9.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 9.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 9.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 9.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 9.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 9.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 8.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 8.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 8.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 8.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 8.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 8.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 8.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 8.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 7.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 7.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 7.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 7.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 7.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 7.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 6.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 6.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 6.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 6.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 6.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 5.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 5.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 4.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 3.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 3.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 2.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 12.1
Samples: 246

Max nTPM: 37.2
Min nTPM: 1.7
Std nTPM: 5.4
Median nTPM: 11.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 37.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 30.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 28.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 28.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 27.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 25.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 24.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 23.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 23.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 22.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 22.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 22.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 21.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 21.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 21.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 21.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 21.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 21.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 20.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 20.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 20.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 20.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 20.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 20.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 20.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 20.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 20.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 19.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 19.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 19.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 19.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 19.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 19.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 18.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 18.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 18.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 18.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 18.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 18.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 17.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 17.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 17.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 17.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 17.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 17.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 17.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 17.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 16.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 16.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 16.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 16.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 16.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 16.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 16.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 16.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 16.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 15.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 15.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 15.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 15.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 15.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 15.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 14.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 14.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 14.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 14.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 14.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 14.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 14.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 14.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 14.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 13.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 13.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 13.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 13.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 13.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 13.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 13.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 13.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 12.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 12.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 12.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 12.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 12.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 12.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 12.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 12.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 12.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 12.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 12.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 12.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 12.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 12.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 12.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 12.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 12.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 12.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 11.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 11.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 11.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 11.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 11.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 11.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 11.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 11.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 11.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 11.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 11.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 11.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 11.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 11.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 11.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 11.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 11.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 11.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 11.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 11.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 11.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 11.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 11.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 11.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 11.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 11.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 11.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 10.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 10.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 10.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 10.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 10.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 10.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 10.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 10.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 10.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 10.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 10.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 10.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 10.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 10.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 10.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 10.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 10.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 10.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 10.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 10.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 10.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 10.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 10.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 10.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 10.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 10.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 9.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 9.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 9.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 9.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 9.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 9.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 9.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 9.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 9.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 9.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 9.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 9.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 9.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 9.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 9.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 9.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 9.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 8.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 8.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 8.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 8.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 8.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 8.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 8.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 8.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 8.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 8.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 8.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 8.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 8.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 8.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 8.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 8.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 8.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 8.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 8.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 8.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 7.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 7.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 7.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 7.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 7.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 7.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 7.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 7.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 7.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 7.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 7.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 7.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 7.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 7.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 7.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 7.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 7.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 7.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 7.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 7.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 7.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 7.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 6.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 6.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 6.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 6.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 6.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 6.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 6.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 6.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 6.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 6.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 6.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 6.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 6.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 6.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 6.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 6.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 6.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 5.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 5.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 5.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 5.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 5.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 5.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 5.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 5.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 5.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 5.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 5.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 4.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 4.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 4.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 4.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 4.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 4.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 4.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 3.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 1.7
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Brain - Putamen (basal ganglia)
Average nTPM: 17.2
Samples: 205

Max nTPM: 51.5
Min nTPM: 1.9
Std nTPM: 8.3
Median nTPM: 16.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 51.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 44.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 43.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 39.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 39.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 36.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 32.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 32.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 32.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 31.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 31.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 31.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 31.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 30.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 30.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 29.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 29.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 28.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 28.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 27.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 27.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 27.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 27.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 27.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 27.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 27.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 27.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 27.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 26.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 26.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 26.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 25.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 25.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 25.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 24.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 24.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 24.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 24.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 24.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 24.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 23.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 22.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 22.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 22.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 22.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 22.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 22.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 22.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 22.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 22.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 21.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 21.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 21.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 21.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 21.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 21.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 21.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 20.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 20.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 20.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 20.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 20.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 20.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 20.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 20.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 20.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 20.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 20.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 19.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 19.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 19.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 19.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 19.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 19.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 19.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 18.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 18.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 18.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 18.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 18.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 18.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 18.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 18.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 18.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 18.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 17.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 17.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 17.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 17.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 17.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 17.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 17.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 17.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 17.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 17.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 17.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 16.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 16.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 16.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 16.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 16.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 16.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 16.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 16.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 16.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 16.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 16.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 15.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 15.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 15.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 15.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 15.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 15.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 14.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 14.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 14.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 14.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 14.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 14.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 14.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 14.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 14.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 14.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 13.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 13.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 13.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 13.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 13.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 13.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 13.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 13.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 13.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 13.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 13.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 13.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 13.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 12.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 12.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 12.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 12.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 12.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 12.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 11.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 11.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 11.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 11.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 11.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 11.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 11.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 11.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 11.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 10.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 10.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 10.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 10.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 10.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 10.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 10.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 10.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 10.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 10.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 10.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 10.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 10.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 10.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 10.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 9.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 9.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 9.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 9.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 9.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 9.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 9.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 9.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 8.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 8.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 8.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 8.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 8.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 8.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 8.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 8.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 8.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 8.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 7.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 7.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 7.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 7.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 7.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 7.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 6.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 6.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 6.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 6.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 6.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 5.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 5.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 5.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 4.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 4.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 4.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 3.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 2.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 1.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

61.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 46.5
FF:10164-103B2 76 years, female 46.5
Nucleus accumbens
Scaled Tags Per Million: 38.9
FF:10037-101F1 23-56 years, mixed 38.9
Putamen
Scaled Tags Per Million: 54.9
FF:10176-103C5 60 years, female 54.9
Globus pallidus
Scaled Tags Per Million: 61.0
FF:10175-103C4 60 years, female 78.4
FF:10161-103A8 76 years, female 43.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

16.2
Pig sample Sample description nTPM
Caudate
nTPM: 13.5
Samples: 4

Max nTPM: 15.0
Min nTPM: 11.9
Sample A Female 11.9
Sample B Female 12.3
Sample C Male 14.6
Sample D Male 15.0
Putamen
nTPM: 12.5
Samples: 4

Max nTPM: 15.6
Min nTPM: 10.6
Sample A Female 10.6
Sample B Female 11.8
Sample C Male 15.6
Sample D Male 12.1
Septum
nTPM: 16.2
Samples: 4

Max nTPM: 30.5
Min nTPM: 8.3
Sample A Female 10.8
Sample B Female 15.1
Sample C Male 8.3
Sample D Male 30.5
Ventral pallidum
nTPM: 11.8
Samples: 4

Max nTPM: 13.5
Min nTPM: 10.4
Sample A Female 13.5
Sample B Female 12.5
Sample C Male 10.6
Sample D Male 10.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 5.2
Samples: 4

Max nTPM: 6.8
Min nTPM: 4.5
Sample A Male 4.5
Sample B Male 4.5
Sample C Female 5.1
Sample D Female 6.8
Septum
nTPM: 8.8
Samples: 4

Max nTPM: 11.1
Min nTPM: 7.2
Sample A Male 7.2
Sample B Male 11.1
Sample C Female 9.2
Sample D Female 7.7
Ventral forebrain
nTPM: 6.7
Samples: 4

Max nTPM: 8.5
Min nTPM: 4.7
Sample A Male 8.5
Sample B Male 4.7
Sample C Female 5.9
Sample D Female 7.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.4
79677341 Antisense, RP_071204_01_F02, Mouse strain C57BL/6J (56 days, male) 0.7
764 Antisense, RP_Baylor_253956, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.3
79677341 Antisense, RP_071204_01_F02, Mouse strain C57BL/6J (56 days, male) 0.5
764 Antisense, RP_Baylor_253956, Mouse strain C57BL/6J (56 days, male) 0.1

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