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TISSUE PRIMARY DATA SALIVARY GLAND Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Salivary gland
Tissue proteome
Salivary gland
Tissue methods
SALIVARY GLAND - Expression summary
Protein expression
Salivary glandi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1946.8 nTPM
HPA:1946.8 nTPM
GTEx:605.3 nTPM
FANTOM5:2658.5 Scaled Tags Per Million
SALIVARY GLAND - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SALIVARY GLAND - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA010592Antibody CAB002506Antibody CAB079994
Glandular cells MediumMediumMedium






SALIVARY GLAND - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1946.8
overview
Female, age 68
Salivary gland sample 216
nTPM: 3951.9
Cell types%
Glandular cells:
45

Ductal cells:
25

Adipocytes:
5

Other cell types:
25

overview
Male, age 60
Salivary gland sample 217
nTPM: 918
Cell types%
Glandular cells:
55

Ductal cells:
20

Adipocytes:
5

Endothelial cells:
5

Other cell types:
15

overview
Female, age 21
Salivary gland sample 218
nTPM: 970.4
Cell types%
Glandular cells:
55

Ductal cells:
15

Adipocytes:
5

Endothelial cells:
5

Other cell types:
20


SALIVARY GLAND - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

605.3
GTEx sample id Sample description nTPM
Minor Salivary Gland
Average nTPM: 605.3
Samples: 181

Max nTPM: 1507.0
Min nTPM: 205.5
Std nTPM: 247.6
Median nTPM: 573.5
GTEX-1HGF4-2326-SM-GA91Q 60-69 years, male 1507.0
GTEX-X3Y1-1926-SM-4PQZO 40-49 years, male 1485.6
GTEX-1R9K5-0626-SM-DPRZB 50-59 years, male 1360.0
GTEX-1AYD5-2726-SM-7MXVG 50-59 years, male 1271.6
GTEX-1QEPI-0626-SM-E76QE 60-69 years, female 1170.2
GTEX-145ME-1626-SM-5RQI3 40-49 years, female 1098.8
GTEX-17KNJ-2726-SM-7KFRE 50-59 years, male 1098.6
GTEX-1JN1M-2426-SM-ARU93 60-69 years, female 1084.7
GTEX-WYVS-2026-SM-4RGNS 40-49 years, female 1080.8
GTEX-1445S-2926-SM-5O993 60-69 years, male 1080.4
GTEX-1314G-2026-SM-5LZUM 30-39 years, male 1060.9
GTEX-1JN6P-2526-SM-CNNPX 60-69 years, male 1057.3
GTEX-1IE54-0826-SM-AHZ2Z 40-49 years, female 1045.6
GTEX-13111-2326-SM-5LZUQ 50-59 years, male 1037.7
GTEX-15SDE-1226-SM-HAV36 50-59 years, female 993.8
GTEX-1R9PM-1726-SM-E76T2 20-29 years, male 973.6
GTEX-11TUW-2426-SM-5EQKB 60-69 years, male 954.3
GTEX-1LVAO-2626-SM-EVR4S 60-69 years, male 950.8
GTEX-14JIY-3026-SM-6EU1R 60-69 years, male 948.6
GTEX-1HR9M-2526-SM-A9G3J 60-69 years, male 930.1
GTEX-1GTWX-2526-SM-9JGHG 60-69 years, male 916.5
GTEX-W5X1-2426-SM-HPAGA 40-49 years, female 901.1
GTEX-1I1HK-2526-SM-A96SM 60-69 years, male 887.8
GTEX-1J8EW-2826-SM-A96T9 60-69 years, female 885.4
GTEX-178AV-1426-SM-6LLID 40-49 years, male 858.4
GTEX-1LH75-2726-SM-HL11E 50-59 years, female 854.8
GTEX-1R9PO-2626-SM-E6CPU 60-69 years, female 850.8
GTEX-WOFM-2126-SM-4M9R4 20-29 years, male 850.6
GTEX-11ZTS-3026-SM-5EQM7 60-69 years, female 843.3
GTEX-X15G-2126-SM-4PQZR 50-59 years, female 842.5
GTEX-1QMI2-0426-SM-EWRND 60-69 years, male 839.4
GTEX-1ICLY-0626-SM-GA915 50-59 years, male 830.5
GTEX-1IDJV-2326-SM-GA8ZL 60-69 years, male 815.7
GTEX-1J1R8-1826-SM-AHZ3B 40-49 years, male 814.0
GTEX-1IY9M-2926-SM-A96TH 60-69 years, male 810.8
GTEX-ZC5H-2726-SM-5KLZW 40-49 years, female 804.2
GTEX-ZXG5-2826-SM-5NQ8T 60-69 years, male 801.7
GTEX-14PN4-2526-SM-686ZG 50-59 years, male 797.0
GTEX-18D9U-2226-SM-7KFTN 40-49 years, male 796.0
GTEX-1S83E-0626-SM-E9TKC 40-49 years, male 792.5
GTEX-13G51-2426-SM-5LZY8 60-69 years, male 790.9
GTEX-1AX9K-2126-SM-72D7K 50-59 years, male 788.2
GTEX-13113-1526-SM-5EGHV 60-69 years, female 782.4
GTEX-Z9EW-1426-SM-HPAG9 40-49 years, male 771.8
GTEX-131XF-2826-SM-5EGKH 60-69 years, male 756.4
GTEX-13OVK-1826-SM-6PALE 40-49 years, male 746.8
GTEX-1MGNQ-1926-SM-DTX8L 40-49 years, male 742.8
GTEX-11P82-0926-SM-5986X 20-29 years, male 735.7
GTEX-1C64O-0626-SM-7DHL1 60-69 years, male 728.6
GTEX-1117F-3026-SM-5GZYU 60-69 years, female 712.0
GTEX-11ZTT-2226-SM-5CVLP 60-69 years, female 711.7
GTEX-ZG7Y-2426-SM-DO11H 50-59 years, male 704.0
GTEX-1IKJJ-2826-SM-GA8ZM 60-69 years, male 690.7
GTEX-1J8QM-1826-SM-A96TA 60-69 years, female 685.8
GTEX-ZA64-1726-SM-5CVMF 20-29 years, male 681.3
GTEX-13NYC-2626-SM-5K7VN 60-69 years, male 675.6
GTEX-1EH9U-2926-SM-7DHLX 60-69 years, male 672.0
GTEX-1B932-0626-SM-731EM 40-49 years, female 669.3
GTEX-WH7G-2126-SM-4M1XU 40-49 years, male 668.7
GTEX-XMK1-2626-SM-4B65R 40-49 years, male 666.9
GTEX-13CF2-2426-SM-5LZYL 60-69 years, male 660.6
GTEX-ZQUD-2126-SM-51MSY 30-39 years, male 658.8
GTEX-WY7C-1426-SM-4OND1 50-59 years, male 653.7
GTEX-1LVAM-0626-SM-HPAFZ 50-59 years, female 647.9
GTEX-1RQED-2926-SM-HPAFT 60-69 years, male 642.4
GTEX-XV7Q-2426-SM-4BRV8 40-49 years, female 639.9
GTEX-Y5V6-2226-SM-4VDTC 60-69 years, male 633.2
GTEX-13OVI-2326-SM-5KM47 60-69 years, female 626.7
GTEX-1I6K7-0926-SM-A96SV 40-49 years, male 624.5
GTEX-1GN1V-2926-SM-9JGI3 60-69 years, male 623.5
GTEX-1QCLZ-2526-SM-EXUST 60-69 years, female 619.3
GTEX-1GF9X-0226-SM-7P8SM 40-49 years, female 618.7
GTEX-1OJC4-3126-SM-EXOJK 50-59 years, female 614.7
GTEX-1S5ZU-0926-SM-HPAEX 20-29 years, female 612.7
GTEX-Y3I4-1926-SM-4TT8L 50-59 years, male 612.6
GTEX-1S82P-0726-SM-EVR4O 60-69 years, female 611.1
GTEX-131XH-2626-SM-5GCNP 50-59 years, male 604.7
GTEX-18A7B-2826-SM-7KFTK 70-79 years, male 602.1
GTEX-ZPU1-2326-SM-57WEP 40-49 years, male 601.9
GTEX-14PJ3-1526-SM-664O9 50-59 years, male 599.2
GTEX-1HFI7-2426-SM-B2LXV 50-59 years, female 589.7
GTEX-1NSGN-0626-SM-E9J35 50-59 years, male 587.1
GTEX-1HSGN-0626-SM-A9G2E 40-49 years, female 581.8
GTEX-1P4AB-2926-SM-EXOJR 50-59 years, male 581.7
GTEX-1HSMQ-0926-SM-A96SI 50-59 years, male 576.7
GTEX-11P81-2026-SM-5P9GT 30-39 years, female 575.3
GTEX-WFJO-2026-SM-4LVM3 30-39 years, male 575.1
GTEX-146FR-1226-SM-5MR78 60-69 years, female 575.0
GTEX-1O97I-2826-SM-HPAEO 60-69 years, male 574.5
GTEX-1IDJC-1626-SM-AHZ2R 50-59 years, male 574.1
GTEX-Y111-2626-SM-4TT24 50-59 years, male 573.5
GTEX-15CHC-1226-SM-686ZH 60-69 years, female 571.0
GTEX-15EU6-2626-SM-7KUN4 50-59 years, male 568.3
GTEX-WHSB-2326-SM-4M1XK 50-59 years, male 557.2
GTEX-1339X-2326-SM-5HL5B 40-49 years, male 556.6
GTEX-11NV4-1926-SM-5N9D4 60-69 years, male 554.4
GTEX-1C6VR-0726-SM-7P8OV 60-69 years, male 554.2
GTEX-1GMR2-2026-SM-7MKHK 50-59 years, male 552.0
GTEX-1IOXB-2826-SM-AHZ32 50-59 years, male 550.9
GTEX-1PIEJ-0626-SM-DTX99 20-29 years, female 548.9
GTEX-1AX8Z-0626-SM-731EH 60-69 years, male 548.6
GTEX-14E1K-2626-SM-664OJ 50-59 years, male 542.9
GTEX-1H1CY-2326-SM-9OSXW 60-69 years, female 541.9
GTEX-13JVG-2926-SM-5J2N9 60-69 years, male 540.1
GTEX-13O21-1926-SM-5MR39 50-59 years, male 532.2
GTEX-1RNSC-2926-SM-EV79L 60-69 years, male 514.1
GTEX-1S5VW-1026-SM-HK797 60-69 years, male 506.4
GTEX-11EMC-2526-SM-5PNVU 60-69 years, female 505.2
GTEX-18A67-0626-SM-7KFSL 50-59 years, male 503.8
GTEX-YF7O-2226-SM-5CVN8 50-59 years, male 502.2
GTEX-1MCQQ-2226-SM-DLHC4 60-69 years, male 501.7
GTEX-1POEN-2226-SM-DPRXV 30-39 years, female 484.1
GTEX-1GPI7-0326-SM-7MKH6 20-29 years, male 482.8
GTEX-1OJC3-1026-SM-E6CQK 20-29 years, male 481.0
GTEX-12WSL-2126-SM-5GCNG 50-59 years, male 477.2
GTEX-1QP28-2026-SM-F2I3M 50-59 years, female 475.1
GTEX-14PJN-1726-SM-69LO7 30-39 years, male 466.0
GTEX-1I6K6-0626-SM-ARU7J 30-39 years, male 465.8
GTEX-15RJE-2726-SM-6LPJ1 40-49 years, male 464.4
GTEX-XGQ4-2626-SM-4AT6B 50-59 years, male 462.9
GTEX-13OVL-2926-SM-5IFG3 50-59 years, male 460.3
GTEX-1HSEH-1826-SM-A96SA 60-69 years, male 455.8
GTEX-1KD4Q-2526-SM-CXZKL 40-49 years, male 447.8
GTEX-15SHV-2226-SM-6M464 60-69 years, male 446.9
GTEX-YB5K-1726-SM-5IFIZ 40-49 years, female 445.9
GTEX-111FC-2926-SM-5GZY7 60-69 years, male 443.2
GTEX-1NHNU-2226-SM-GRR2I 50-59 years, male 443.1
GTEX-1QP9N-2026-SM-DPRZT 30-39 years, male 442.2
GTEX-YJ8A-1826-SM-GNTAB 20-29 years, male 440.8
GTEX-1I4MK-1326-SM-B2LWT 50-59 years, female 440.7
GTEX-1R9K4-0526-SM-E76P1 60-69 years, male 438.0
GTEX-13NYB-2426-SM-5IFF4 40-49 years, male 437.7
GTEX-1C4CL-2026-SM-731EB 30-39 years, male 434.5
GTEX-12WSN-2226-SM-5DUXT 40-49 years, male 427.2
GTEX-1B8KZ-1726-SM-73KV7 50-59 years, male 424.1
GTEX-1HCU7-0126-SM-C1YR3 50-59 years, male 422.2
GTEX-1GZ2Q-2526-SM-9KNVW 40-49 years, male 415.5
GTEX-1JKYR-0726-SM-AHZ3K 20-29 years, male 410.9
GTEX-14B4R-1426-SM-5Q5CG 30-39 years, male 408.5
GTEX-ZT9W-2126-SM-51MSF 50-59 years, male 407.1
GTEX-1AMEY-1126-SM-72D79 30-39 years, female 406.1
GTEX-1LKK1-2926-SM-EVR4Z 50-59 years, female 404.6
GTEX-1LBAC-0626-SM-D3L9T 20-29 years, male 403.4
GTEX-1KD5A-2226-SM-EV79U 50-59 years, male 400.9
GTEX-1RAZA-0626-SM-EAZ4H 20-29 years, male 400.2
GTEX-12WSM-1826-SM-5BC64 60-69 years, male 399.4
GTEX-1MCC2-2226-SM-EV7AJ 30-39 years, female 396.2
GTEX-1LC47-2426-SM-DHXKK 60-69 years, male 389.0
GTEX-1H4P4-2026-SM-9WPNV 50-59 years, male 380.7
GTEX-X5EB-1726-SM-4E3J7 40-49 years, male 377.2
GTEX-1PPH8-1526-SM-E6CQO 20-29 years, male 374.5
GTEX-1HFI6-2826-SM-GA91I 40-49 years, male 373.2
GTEX-1PDJ9-2126-SM-HPAFH 20-29 years, male 369.6
GTEX-ZE7O-2926-SM-51MSG 50-59 years, female 361.5
GTEX-13QJC-2326-SM-5Q5CD 60-69 years, female 353.4
GTEX-1GN1W-2526-SM-9JGHX 50-59 years, female 352.3
GTEX-1CB4I-2526-SM-7MKG1 50-59 years, male 350.0
GTEX-1IDJD-2526-SM-C1YSA 30-39 years, male 347.2
GTEX-1LVA9-2526-SM-EVR5H 50-59 years, male 343.0
GTEX-1C64N-2926-SM-79OLM 50-59 years, male 341.2
GTEX-1B8SF-1826-SM-731DJ 60-69 years, male 338.1
GTEX-17MFQ-1626-SM-7938Z 20-29 years, male 337.6
GTEX-ZAB5-2326-SM-5IJFR 50-59 years, male 331.8
GTEX-13VXT-1726-SM-5IFF5 20-29 years, female 329.5
GTEX-Y5LM-1826-SM-4VDT9 40-49 years, female 327.9
GTEX-11EQ9-2026-SM-5P9JI 30-39 years, male 326.1
GTEX-1HSMP-1926-SM-GA8Z5 70-79 years, male 324.7
GTEX-1LSNL-2626-SM-EV7AT 50-59 years, male 323.0
GTEX-ZF29-2126-SM-DNZYX 60-69 years, female 322.9
GTEX-1KANC-1326-SM-CYPT8 50-59 years, female 322.6
GTEX-1A3MV-1726-SM-72D68 30-39 years, male 311.3
GTEX-1B97J-2126-SM-79OL6 50-59 years, female 290.5
GTEX-ZLWG-2026-SM-DO11F 50-59 years, female 283.2
GTEX-11WQK-2926-SM-5EQKT 50-59 years, male 280.4
GTEX-12BJ1-2226-SM-5BC6G 60-69 years, male 250.5
GTEX-ZP4G-1926-SM-57WDZ 20-29 years, female 250.2
GTEX-18QFQ-0626-SM-718AW 30-39 years, male 247.2
GTEX-ZLFU-2226-SM-EXUS7 40-49 years, male 236.7
GTEX-13QBU-2126-SM-5KLZN 40-49 years, female 232.6
GTEX-1192X-2926-SM-5N9BA 50-59 years, male 227.4
GTEX-X261-2426-SM-4PQZU 50-59 years, male 205.5
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SALIVARY GLAND - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

2658.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Parotid gland
Scaled Tags Per Million: 1821.4
FF:10199-103F1 23 years, male 1821.4
Salivary gland
Scaled Tags Per Million: 2658.5
FF:10093-102C3 16-60 years, mixed 2658.5
Submaxillary gland
Scaled Tags Per Million: 2031.9
FF:10202-103F4 24 years, male 2031.9

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