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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
199.0
nTPM
Monaco:
347.6
nTPM
Schmiedel:
226.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
199.0
HPA sample
nTPM
gdT-cell nTPM: 157.3
Samples: 6
Max nTPM: 204.3
Min nTPM: 117.5
P10809_1007
127.8
P10809_1022
204.3
P10809_1041
155.5
P10809_1060
117.5
P10809_1077
163.3
P10809_1098
175.2
MAIT T-cell nTPM: 199.0
Samples: 6
Max nTPM: 230.9
Min nTPM: 169.3
P10809_1006
179.6
P10809_1024
230.9
P10809_1043
169.3
P10809_1062
190.5
P10809_1083
202.4
P10809_1097
221.5
Memory CD4 T-cell nTPM: 137.3
Samples: 6
Max nTPM: 183.9
Min nTPM: 106.8
P10809_1014
130.5
P10809_1026
106.8
P10809_1045
126.0
P10809_1064
133.1
P10809_1086
183.9
P10809_1113
143.5
Memory CD8 T-cell nTPM: 148.3
Samples: 5
Max nTPM: 158.8
Min nTPM: 128.7
P10809_1012
128.7
P10809_1027
150.3
P10809_1046
148.2
P10809_1065
158.8
P10809_1111
155.3
Naive CD4 T-cell nTPM: 110.6
Samples: 6
Max nTPM: 132.7
Min nTPM: 93.4
P10809_1015
122.1
P10809_1030
93.5
P10809_1049
93.4
P10809_1068
121.9
P10809_1085
132.7
P10809_1112
100.1
Naive CD8 T-cell nTPM: 129.7
Samples: 6
Max nTPM: 194.3
Min nTPM: 89.2
P10809_1016
89.2
P10809_1031
121.5
P10809_1050
111.9
P10809_1069
150.1
P10809_1087
194.3
P10809_1110
111.0
T-reg nTPM: 140.4
Samples: 6
Max nTPM: 159.7
Min nTPM: 120.8
P10809_1018
120.8
P10809_1037
159.7
P10809_1056
137.9
P10809_1075
140.1
P10809_1094
138.3
P10809_1106
145.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
347.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 247.9
Samples: 4
Max nTPM: 282.0
Min nTPM: 218.7
RHH5202_R3573
244.7
RHH5230_R3602
282.0
RHH5259_R3631
246.2
RHH5288_R3660
218.7
Effector memory CD8 T-cell nTPM: 329.8
Samples: 4
Max nTPM: 401.7
Min nTPM: 284.1
RHH5203_R3574
284.1
RHH5231_R3603
308.2
RHH5260_R3632
325.1
RHH5289_R3661
401.7
MAIT T-cell nTPM: 347.6
Samples: 4
Max nTPM: 434.5
Min nTPM: 275.4
RHH5233_R3605
335.8
RHH5205_R3576
434.5
RHH5262_R3634
344.5
RHH5297_R3663
275.4
Memory CD4 T-cell TFH nTPM: 207.1
Samples: 4
Max nTPM: 293.0
Min nTPM: 137.3
RHH5300_R3666
137.3
RHH5236_R3608
293.0
RHH5265_R3637
180.9
RHH5208_R3579
217.1
Memory CD4 T-cell Th1 nTPM: 214.6
Samples: 4
Max nTPM: 245.9
Min nTPM: 182.0
RHH5210_R3581
198.5
RHH5302_R3668
182.0
RHH5238_R3610
232.1
RHH5267_R3639
245.9
Memory CD4 T-cell Th1/Th17 nTPM: 281.9
Samples: 4
Max nTPM: 302.9
Min nTPM: 245.0
RHH5303_R3669
287.5
RHH5211_R3582
292.2
RHH5239_R3611
302.9
RHH5268_R3640
245.0
Memory CD4 T-cell Th17 nTPM: 289.8
Samples: 4
Max nTPM: 383.0
Min nTPM: 237.6
RHH5304_R3670
273.7
RHH5212_R3583
264.7
RHH5240_R3612
383.0
RHH5269_R3641
237.6
Memory CD4 T-cell Th2 nTPM: 292.7
Samples: 4
Max nTPM: 365.2
Min nTPM: 245.6
RHH5305_R3671
253.8
RHH5213_R3584
365.2
RHH5241_R3613
306.2
RHH5270_R3642
245.6
Naive CD4 T-cell nTPM: 179.6
Samples: 4
Max nTPM: 201.8
Min nTPM: 164.0
RHH5306_R3672
164.0
RHH5214_R3585
201.8
RHH5242_R3614
166.8
RHH5271_R3643
185.9
Naive CD8 T-cell nTPM: 180.4
Samples: 4
Max nTPM: 196.0
Min nTPM: 165.4
RHH5201_R3572
165.4
RHH5229_R3601
196.0
RHH5258_R3630
173.8
RHH5287_R3659
186.4
Non-Vd2 gdTCR nTPM: 299.7
Samples: 4
Max nTPM: 355.1
Min nTPM: 235.9
RHH5235_R3607
355.1
RHH5264_R3636
309.4
RHH5207_R3578
298.2
RHH5299_R3665
235.9
T-reg nTPM: 208.0
Samples: 4
Max nTPM: 272.6
Min nTPM: 154.0
RHH5301_R3667
154.0
RHH5237_R3609
272.6
RHH5266_R3638
199.0
RHH5209_R3580
206.2
Terminal effector memory CD4 T-cell nTPM: 305.6
Samples: 2
Max nTPM: 322.9
Min nTPM: 288.3
RHH5243_R3615
322.9
RHH5272_R3644
288.3
Terminal effector memory CD8 T-cell nTPM: 328.8
Samples: 4
Max nTPM: 392.9
Min nTPM: 267.3
RHH5232_R3604
392.9
RHH5204_R3575
269.5
RHH5261_R3633
385.3
RHH5296_R3662
267.3
Vd2 gdTCR nTPM: 289.1
Samples: 4
Max nTPM: 323.6
Min nTPM: 227.0
RHH5234_R3606
291.3
RHH5206_R3577
314.5
RHH5263_R3635
323.6
RHH5298_R3664
227.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.