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  • TISSUE

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  • PHACTR3
TISSUE HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE
MIDBRAIN OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:52.4 nTPM
HPA Brain:91.3 nTPM
GTEx:52.4 nTPM
Pig:24.7 nTPM
Mouse:48.2 nTPM
Allen mouse:4.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

91.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 35.6
1961 Female, age 42, unknown 41.2
2226 Male, age 75, left hemisphere 29.9
Dorsomedial nucleus
nTPM: 60.1
1989 Male, age 62, unknown 75.0
2017 Female, age 42, unknown 68.7
2041 Female, age 72, unknown 36.7
Lateral hypothalamic area
nTPM: 54.0
2412 Male, age 62, unknown 65.7
2228 Male, age 66, unknown 57.0
1791 Male, age 80, right hemisphere 48.2
2271 Male, age 75, both hemispheres 45.1
Mammillary body
nTPM: 84.1
1834 Female, age 42, unknown 98.2
1945 Male, age 80, right hemisphere 92.3
1948 Female, age 72, unknown 88.6
1923 Female, age 72, unknown 76.4
2413 Male, age 66, unknown 65.1
Paraventricular nucleus
nTPM: 91.3
2700 Male, age 62, unknown 91.3
Preoptic area
nTPM: 66.3
2414 Female, age 72, unknown 93.5
1861 Female, age 42, unknown 69.8
1907 Male, age 80, right hemisphere 35.7
Supraoptic nucleus
nTPM: 61.8
2043 Male, age 62, unknown 64.3
2835 Female, age 72, unknown 62.7
1894 Female, age 72, unknown 58.4
Ventromedial nucleus
nTPM: 39.4
1982 Female, age 72, unknown 40.8
1822 Female, age 42, unknown 37.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

52.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 52.4
Samples: 257

Max nTPM: 256.7
Min nTPM: 17.4
Std nTPM: 28.2
Median nTPM: 44.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 256.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 174.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 144.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 140.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 139.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 128.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 126.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 123.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 110.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 109.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 108.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 106.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 103.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 101.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 101.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 94.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 94.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 90.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 89.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 89.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 89.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 88.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 88.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 88.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 86.3
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 86.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 85.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 85.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 84.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 84.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 83.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 82.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 81.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 81.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 79.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 79.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 78.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 78.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 78.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 75.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 75.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 75.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 74.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 74.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 73.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 73.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 72.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 70.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 70.1
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 70.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 69.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 69.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 69.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 68.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 67.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 67.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 66.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 65.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 65.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 65.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 65.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 64.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 62.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 62.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 62.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 61.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 60.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 60.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 60.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 60.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 59.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 59.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 58.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 58.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 57.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 57.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 57.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 57.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 57.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 56.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 56.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 56.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 56.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 55.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 55.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 55.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 55.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 55.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 55.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 54.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 54.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 53.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 53.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 53.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 53.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 53.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 53.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 52.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 52.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 51.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 51.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 51.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 51.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 50.1
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 49.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 49.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 49.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 49.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 49.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 48.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 48.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 48.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 48.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 48.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 48.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 47.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 47.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 47.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 47.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 47.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 46.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 45.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 45.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 45.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 45.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 45.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 44.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 44.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 44.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 44.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 44.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 44.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 44.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 44.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 43.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 43.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 43.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 42.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 42.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 42.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 42.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 42.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 42.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 42.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 42.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 42.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 41.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 41.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 41.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 40.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 40.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 40.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 40.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 40.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 40.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 40.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 40.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 40.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 40.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 39.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 39.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 39.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 39.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 39.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 39.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 39.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 39.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 39.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 39.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 38.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 38.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 37.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 37.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 37.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 37.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 36.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 36.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 36.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 36.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 36.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 36.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 35.9
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 35.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 35.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 35.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 35.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 35.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 35.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 35.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 34.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 34.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 34.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 34.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 34.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 33.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 33.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 33.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 33.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 32.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 32.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 32.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 32.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 32.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 32.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 31.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 31.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 31.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 31.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 31.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 31.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 31.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 31.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 31.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 30.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 30.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 30.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 29.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 29.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 29.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 29.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 29.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 29.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 29.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 28.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 28.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 28.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 28.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 28.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 27.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 26.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 26.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 26.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 26.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 26.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 25.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 25.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 25.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 25.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 25.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 25.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 25.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 24.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 24.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 24.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 23.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 22.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 22.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 22.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 22.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 21.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 20.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 20.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 20.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 20.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 19.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 18.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 17.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

24.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 24.8
Samples: 4

Max nTPM: 28.4
Min nTPM: 17.4
Sample A Female 28.2
Sample B Female 28.4
Sample C Male 25.1
Sample D Male 17.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

48.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 48.2
Samples: 4

Max nTPM: 51.1
Min nTPM: 44.8
Sample A Male 44.8
Sample B Male 51.1
Sample C Female 50.7
Sample D Female 46.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 4.7
69837922 Antisense, RP_050224_01_B10, Mouse strain C57BL/6J (56 days, male) 4.7

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