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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
578.2
nTPM
Monaco:
1143.5
nTPM
Schmiedel:
646.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
578.2
HPA sample
nTPM
gdT-cell nTPM: 420.8
Samples: 6
Max nTPM: 480.0
Min nTPM: 356.3
P10809_1007
356.3
P10809_1022
473.2
P10809_1041
480.0
P10809_1060
376.1
P10809_1077
423.3
P10809_1098
415.7
MAIT T-cell nTPM: 546.6
Samples: 6
Max nTPM: 706.9
Min nTPM: 474.1
P10809_1006
512.4
P10809_1024
706.9
P10809_1043
526.0
P10809_1062
549.4
P10809_1083
474.1
P10809_1097
510.7
Memory CD4 T-cell nTPM: 496.2
Samples: 6
Max nTPM: 592.9
Min nTPM: 415.8
P10809_1014
502.5
P10809_1026
592.9
P10809_1045
538.2
P10809_1064
415.8
P10809_1086
459.8
P10809_1113
467.9
Memory CD8 T-cell nTPM: 451.9
Samples: 5
Max nTPM: 495.4
Min nTPM: 413.1
P10809_1012
495.1
P10809_1027
495.4
P10809_1046
430.4
P10809_1065
425.5
P10809_1111
413.1
Naive CD4 T-cell nTPM: 554.8
Samples: 6
Max nTPM: 657.6
Min nTPM: 502.8
P10809_1015
502.8
P10809_1030
657.6
P10809_1049
561.8
P10809_1068
577.8
P10809_1085
509.9
P10809_1112
518.9
Naive CD8 T-cell nTPM: 480.5
Samples: 6
Max nTPM: 562.9
Min nTPM: 403.1
P10809_1016
511.9
P10809_1031
562.9
P10809_1050
478.7
P10809_1069
487.5
P10809_1087
403.1
P10809_1110
438.9
T-reg nTPM: 578.2
Samples: 6
Max nTPM: 755.7
Min nTPM: 510.2
P10809_1018
510.2
P10809_1037
755.7
P10809_1056
568.5
P10809_1075
539.1
P10809_1094
564.5
P10809_1106
531.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1143.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 963.4
Samples: 4
Max nTPM: 1113.2
Min nTPM: 781.9
RHH5202_R3573
1113.2
RHH5230_R3602
931.1
RHH5259_R3631
781.9
RHH5288_R3660
1027.3
Effector memory CD8 T-cell nTPM: 1043.0
Samples: 4
Max nTPM: 1334.7
Min nTPM: 796.1
RHH5203_R3574
1334.7
RHH5231_R3603
964.6
RHH5260_R3632
796.1
RHH5289_R3661
1076.5
MAIT T-cell nTPM: 1143.5
Samples: 4
Max nTPM: 1325.5
Min nTPM: 1055.8
RHH5233_R3605
1325.5
RHH5205_R3576
1113.0
RHH5262_R3634
1055.8
RHH5297_R3663
1079.7
Memory CD4 T-cell TFH nTPM: 1027.8
Samples: 4
Max nTPM: 1273.0
Min nTPM: 856.9
RHH5300_R3666
856.9
RHH5236_R3608
993.1
RHH5265_R3637
988.0
RHH5208_R3579
1273.0
Memory CD4 T-cell Th1 nTPM: 901.6
Samples: 4
Max nTPM: 1032.2
Min nTPM: 771.9
RHH5210_R3581
1032.2
RHH5302_R3668
937.6
RHH5238_R3610
771.9
RHH5267_R3639
864.5
Memory CD4 T-cell Th1/Th17 nTPM: 928.9
Samples: 4
Max nTPM: 1089.9
Min nTPM: 766.2
RHH5303_R3669
1089.9
RHH5211_R3582
1013.0
RHH5239_R3611
846.5
RHH5268_R3640
766.2
Memory CD4 T-cell Th17 nTPM: 914.0
Samples: 4
Max nTPM: 1003.8
Min nTPM: 733.2
RHH5304_R3670
957.8
RHH5212_R3583
961.1
RHH5240_R3612
1003.8
RHH5269_R3641
733.2
Memory CD4 T-cell Th2 nTPM: 1026.2
Samples: 4
Max nTPM: 1191.1
Min nTPM: 887.4
RHH5305_R3671
887.4
RHH5213_R3584
1104.5
RHH5241_R3613
1191.1
RHH5270_R3642
921.7
Naive CD4 T-cell nTPM: 986.6
Samples: 4
Max nTPM: 1103.4
Min nTPM: 927.5
RHH5306_R3672
927.5
RHH5214_R3585
1103.4
RHH5242_R3614
964.8
RHH5271_R3643
950.5
Naive CD8 T-cell nTPM: 956.1
Samples: 4
Max nTPM: 1189.1
Min nTPM: 680.4
RHH5201_R3572
1189.1
RHH5229_R3601
680.4
RHH5258_R3630
989.4
RHH5287_R3659
965.6
Non-Vd2 gdTCR nTPM: 938.6
Samples: 4
Max nTPM: 1046.2
Min nTPM: 844.6
RHH5235_R3607
969.6
RHH5264_R3636
893.9
RHH5207_R3578
1046.2
RHH5299_R3665
844.6
T-reg nTPM: 915.1
Samples: 4
Max nTPM: 1060.3
Min nTPM: 808.1
RHH5301_R3667
882.2
RHH5237_R3609
1060.3
RHH5266_R3638
808.1
RHH5209_R3580
909.7
Terminal effector memory CD4 T-cell nTPM: 1018.3
Samples: 2
Max nTPM: 1025.9
Min nTPM: 1010.7
RHH5243_R3615
1025.9
RHH5272_R3644
1010.7
Terminal effector memory CD8 T-cell nTPM: 943.1
Samples: 4
Max nTPM: 1116.5
Min nTPM: 747.2
RHH5232_R3604
1116.5
RHH5204_R3575
962.6
RHH5261_R3633
747.2
RHH5296_R3662
946.1
Vd2 gdTCR nTPM: 1005.9
Samples: 4
Max nTPM: 1134.8
Min nTPM: 913.6
RHH5234_R3606
1134.8
RHH5206_R3577
1014.5
RHH5263_R3635
960.5
RHH5298_R3664
913.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.