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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
95.0
nTPM
HPA Brain:
107.3
nTPM
GTEx:
95.0
nTPM
FANTOM5:
142.6
Scaled Tags Per Million
Pig:
90.9
nTPM
Mouse:
129.0
nTPM
Allen mouse:
3.5
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
107.3
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 91.6
2666
Male, age 74, left hemisphere
126.8
2019
Male, age 18, unknown
106.4
1827
Male, age 72, unknown
105.9
2411
Female, age 72, unknown
93.9
2828
Female, age 72, unknown
89.2
1870
Female, age 42, unknown
85.7
2219
Male, age 76, both hemispheres
81.4
1833
Male, age 53, unknown
76.7
2586
Male, age 75, left hemisphere
75.0
1830
Male, age 51, unknown
74.7
Dorsal raphe nucleus nTPM: 98.1
2298
Female, age 72, unknown
135.1
2750
Male, age 76, both hemispheres
99.0
2047
Male, age 72, unknown
92.0
1828
Male, age 53, unknown
89.3
2016
Female, age 72, unknown
74.8
Inferior colliculus nTPM: 81.4
2097
Female, age 72, unknown
107.1
1848
Female, age 42, unknown
74.8
1890
Male, age 53, unknown
73.1
2849
Male, age 72, unknown
70.4
Median raphe nucleus nTPM: 95.0
2220
Male, age 76, midline
95.0
Periaquaductal grey, anterior nTPM: 92.9
1795
Male, age 51, unknown
107.3
1947
Male, age 18, unknown
98.1
2502
Female, age 75, unknown
73.3
Periaquaductal grey, dorsal nTPM: 74.9
1831
Male, age 72, unknown
76.5
1840
Male, age 53, unknown
76.0
2464
Female, age 72, unknown
74.5
2850
Male, age 76, both hemispheres
72.8
Periaquaductal grey, lateral nTPM: 83.0
2272
Male, age 74, both hemispheres
107.0
2053
Male, age 18, unknown
74.0
2140
Male, age 76, both hemispheres
68.0
Pretectal area nTPM: 107.3
1816
Male, age 51, unknown
136.0
2007
Male, age 72, unknown
132.3
1817
Female, age 42, unknown
129.2
1944
Female, age 72, unknown
120.7
1815
Male, age 53, unknown
120.5
2667
Female, age 75, unknown
110.2
2224
Female, age 72, unknown
108.0
2273
Male, age 74, both hemispheres
102.0
2825
Male, age 18, unknown
77.4
2407
Male, age 75, both hemispheres
74.4
2316
Male, age 76, right hemisphere
69.4
Red nucleus nTPM: 81.2
2785
Male, age 18, unknown
94.7
1821
Female, age 72, unknown
93.4
2503
Female, age 72, unknown
90.7
1865
Male, age 51, unknown
85.6
1904
Male, age 53, unknown
84.4
1954
Female, age 42, unknown
79.1
2823
Male, age 76, right hemisphere
78.6
2769
Male, age 72, unknown
78.2
2227
Male, age 72, unknown
76.2
2725
Female, age 75, unknown
76.2
2584
Male, age 75, left hemisphere
69.1
2588
Male, age 74, left hemisphere
67.9
Substantia nigra nTPM: 99.2
1916
Female, age 42, unknown
137.0
1889
Female, age 72, unknown
117.2
1851
Male, age 51, unknown
116.5
1941
Male, age 53, unknown
103.6
2241
Male, age 72, unknown
98.5
2665
Male, age 74, both hemispheres
94.1
2583
Male, age 75, right hemisphere
86.3
2409
Female, age 72, unknown
85.8
2699
Male, age 18, unknown
81.7
2590
Female, age 75, unknown
71.6
Superior colliculus nTPM: 95.2
2668
Female, age 75, unknown
157.1
1796
Male, age 53, unknown
113.2
2261
Male, age 18, unknown
110.0
2087
Female, age 72, unknown
105.0
1913
Female, age 42, unknown
93.8
2587
Male, age 74, left hemisphere
87.7
1895
Male, age 76, right hemisphere
81.2
1995
Male, age 72, unknown
78.0
1839
Male, age 51, unknown
71.0
2664
Male, age 75, both hemispheres
55.2
Ventral tegmental area nTPM: 99.3
2410
Female, age 72, unknown
131.1
2218
Male, age 76, both hemispheres
113.0
1915
Female, age 42, unknown
100.3
2223
Female, age 72, unknown
87.9
2021
Male, age 53, unknown
84.7
1942
Male, age 51, unknown
79.1
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
95.0
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 95.0
Samples: 139
Max nTPM: 170.2
Min nTPM: 56.2
Std nTPM: 24.4
Median nTPM: 90.2
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
170.2
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
169.0
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
166.1
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
158.8
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
158.1
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
156.0
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
150.6
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
144.3
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
144.1
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
138.5
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
135.3
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
131.7
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
129.6
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
129.3
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
127.7
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
127.7
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
127.4
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
126.9
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
126.8
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
124.8
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
123.5
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
119.9
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
117.6
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
116.3
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
115.8
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
115.2
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
114.1
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
112.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
110.4
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
109.3
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
108.6
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
107.7
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
107.4
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
106.6
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
106.2
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
106.0
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
106.0
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
104.5
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
103.2
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
102.0
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
101.0
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
99.5
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
99.3
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
98.6
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
98.5
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
98.5
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
98.4
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
97.7
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
97.4
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
97.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
97.1
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
96.3
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
95.5
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
95.5
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
95.4
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
94.7
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
94.4
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
94.4
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
94.0
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
93.2
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
92.4
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
92.4
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
92.2
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
92.1
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
92.0
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
91.8
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
91.7
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
91.7
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
90.7
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
90.2
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
89.5
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
89.4
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
89.4
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
88.6
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
88.2
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
87.9
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
87.9
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
86.7
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
86.0
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
85.6
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
85.5
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
85.2
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
84.8
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
84.6
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
84.6
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
84.5
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
83.6
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
82.6
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
82.6
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
82.3
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
82.0
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
81.7
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
81.5
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
81.5
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
81.4
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
81.4
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
81.2
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
81.0
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
80.7
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
80.5
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
80.5
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
80.4
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
80.1
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
79.4
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
78.7
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
78.4
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
78.2
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
77.0
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
76.9
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
76.6
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
76.6
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
76.1
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
75.0
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
75.0
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
74.9
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
74.7
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
74.0
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
73.5
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
72.6
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
72.2
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
71.5
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
70.5
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
69.8
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
69.7
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
68.5
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
67.9
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
67.2
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
67.2
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
66.1
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
65.2
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
64.9
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
64.9
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
62.7
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
61.6
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
60.6
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
59.5
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
59.0
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
58.1
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
56.2
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
129.0
Mouse sample
Sample description
nTPM
Midbrain nTPM: 129.0
Samples: 4
Max nTPM: 131.6
Min nTPM: 125.3
Sample A
Male
130.5
Sample B
Male
128.6
Sample C
Female
125.3
Sample D
Female
131.6
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.