HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:157.7 nTPM
HPA Brain:125.6 nTPM
GTEx:157.7 nTPM
FANTOM5:301.3 Scaled Tags Per Million
Pig:154.5 nTPM
Mouse:548.1 nTPM
Allen mouse:24.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029780Antibody HPA056488
Glial cells Not detectedMedium
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 125.6
Sample id Sample description nTPM
Hippocampus
nTPM: 124.2
2529 Female, age 94, left hemisphere 144.5
2621 Female, age 67, right hemisphere 135.6
1898 Male, age 80, left hemisphere 133.6
2148 Female, age 91, left hemisphere 119.7
1911 Female, age 85, right hemisphere 119.6
1855 Male, age 76, left hemisphere 92.1
Dentate gyrus
nTPM: 114.9
2530 Female, age 94, left hemisphere 140.3
2528 Male, age 74, both hemispheres 125.1
2010 Male, age 76, both hemispheres 118.4
2246 Female, age 85, both hemispheres 112.9
1927 Female, age 91, both hemispheres 101.4
2531 Female, age 67, both hemispheres 91.2
Entorhinal gyrus
nTPM: 113.1
2117 Female, age 91, right hemisphere 161.8
2764 Male, age 80, right hemisphere 126.1
1938 Female, age 85, left hemisphere 123.4
1787 Male, age 76, left hemisphere 99.2
2613 Female, age 94, left hemisphere 89.7
2686 Male, age 75, right hemisphere 78.2
Hippocampus, CA1
nTPM: 121.4
2527 Male, age 74, both hemispheres 164.5
2749 Male, age 80, left hemisphere 132.1
1873 Female, age 85, both hemispheres 112.2
2082 Female, age 91, right hemisphere 108.4
2045 Male, age 76, both hemispheres 89.8
Hippocampus, CA2
nTPM: 125.6
2249 Male, age 74, both hemispheres 181.8
1963 Male, age 80, left hemisphere 124.4
2437 Female, age 94, left hemisphere 117.4
2113 Female, age 91, right hemisphere 112.0
1940 Female, age 85, left hemisphere 109.4
1892 Male, age 76, both hemispheres 108.4
Hippocampus, CA3
nTPM: 119.8
2436 Male, age 74, both hemispheres 175.6
1891 Female, age 85, both hemispheres 131.4
2620 Female, age 94, left hemisphere 106.5
1867 Male, age 76, both hemispheres 104.3
2137 Male, age 80, left hemisphere 104.2
2861 Female, age 67, both hemispheres 97.0
Parahippocampal cortex
nTPM: 115.7
2250 Female, age 67, right hemisphere 140.6
2245 Female, age 91, both hemispheres 124.9
1990 Female, age 91, right hemisphere 120.5
2622 Female, age 67, right hemisphere 116.4
1933 Female, age 85, both hemispheres 116.1
2532 Female, age 72, left hemisphere 115.7
2692 Male, age 74, both hemispheres 113.0
1850 Male, age 80, both hemispheres 110.9
2018 Male, age 76, both hemispheres 101.9
2693 Female, age 94, both hemispheres 96.6
Perirhinal gyrus
nTPM: 114.2
1847 Female, age 91, left hemisphere 123.2
1841 Female, age 85, right hemisphere 122.8
1794 Male, age 80, right hemisphere 119.7
2521 Female, age 94, right hemisphere 111.1
2848 Male, age 76, right hemisphere 94.3
Subiculum
nTPM: 120.7
2619 Male, age 74, both hemispheres 140.5
2042 Male, age 76, both hemispheres 134.9
1977 Female, age 85, both hemispheres 127.0
1901 Male, age 80, both hemispheres 120.0
2438 Female, age 94, left hemisphere 102.1
2729 Female, age 91, right hemisphere 100.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 157.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 157.7
Samples: 255

Max nTPM: 528.7
Min nTPM: 83.7
Std nTPM: 41.6
Median nTPM: 150.0
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 528.7
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 280.5
GTEX-14DAQ-0011-R1a-SM-G8W85 60-69 years, female 258.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 244.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 236.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 233.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 233.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 227.5
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 227.3
GTEX-1PIIG-0011-R1a-SM-F649P 30-39 years, male 227.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 225.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 301.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 301.3
FF:10153-102I9 76 years, female 344.1
FF:10169-103B7 60 years, female 258.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 154.5
Pig sample Sample description nTPM
Subiculum
nTPM: 127.9
Samples: 4

Max nTPM: 170.1
Min nTPM: 109.7
Sample A Female 170.1
Sample B Female 112.2
Sample C Male 109.7
Sample D Male 119.7
Dorsal hippocampus
nTPM: 146.9
Samples: 4

Max nTPM: 180.9
Min nTPM: 112.1
Sample A Female 180.9
Sample B Female 125.7
Sample C Male 168.8
Sample D Male 112.1
Entorhinal cortex
nTPM: 154.5
Samples: 4

Max nTPM: 162.3
Min nTPM: 149.5
Sample A Female 162.3
Sample B Female 154.7
Sample C Male 151.5
Sample D Male 149.5
Ventral hippocampus
nTPM: 131.7
Samples: 4

Max nTPM: 168.5
Min nTPM: 87.2
Sample A Female 128.3
Sample B Female 87.2
Sample C Male 168.5
Sample D Male 142.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 548.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 546.1
Samples: 4

Max nTPM: 570.8
Min nTPM: 516.6
Sample A Male 542.4
Sample B Male 516.6
Sample C Female 554.7
Sample D Female 570.8
Hippocampal formation
nTPM: 548.1
Samples: 4

Max nTPM: 573.6
Min nTPM: 497.0
Sample A Male 555.3
Sample B Male 497.0
Sample C Female 573.6
Sample D Female 566.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 24.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 24.0
544902 Antisense, RP_040420_01_H11, Mouse strain C57BL/6J (56 days, male) 25.1
75694901 Antisense, RP_060518_04_A09, Mouse strain C57BL/6J (56 days, male) 23.0

Contact

The Project

The Human Protein Atlas

KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo