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  • SUMMARY

  • TISSUE

  • BRAIN

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:139.3 nTPM
HPA Brain:169.0 nTPM
GTEx:139.3 nTPM
Pig:190.2 nTPM
Mouse:842.7 nTPM
Allen mouse:27.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

169.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 126.9
2226 Male, age 75, left hemisphere 148.7
1961 Female, age 42, unknown 105.2
Dorsomedial nucleus
nTPM: 134.8
1989 Male, age 62, unknown 159.3
2017 Female, age 42, unknown 126.1
2041 Female, age 72, unknown 119.0
Lateral hypothalamic area
nTPM: 136.0
2271 Male, age 75, both hemispheres 166.0
1791 Male, age 80, right hemisphere 151.0
2228 Male, age 66, unknown 139.9
2412 Male, age 62, unknown 87.2
Mammillary body
nTPM: 169.0
1923 Female, age 72, unknown 199.9
2413 Male, age 66, unknown 170.0
1834 Female, age 42, unknown 161.9
1948 Female, age 72, unknown 159.8
1945 Male, age 80, right hemisphere 153.6
Paraventricular nucleus
nTPM: 140.6
2700 Male, age 62, unknown 140.6
Preoptic area
nTPM: 129.4
2414 Female, age 72, unknown 134.8
1861 Female, age 42, unknown 130.4
1907 Male, age 80, right hemisphere 122.9
Supraoptic nucleus
nTPM: 147.9
1894 Female, age 72, unknown 161.0
2043 Male, age 62, unknown 149.4
2835 Female, age 72, unknown 133.4
Ventromedial nucleus
nTPM: 112.0
1982 Female, age 72, unknown 123.2
1822 Female, age 42, unknown 100.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

139.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 139.3
Samples: 257

Max nTPM: 354.4
Min nTPM: 73.0
Std nTPM: 39.9
Median nTPM: 133.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 354.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 351.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 289.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 279.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 263.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 257.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 253.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 227.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 226.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 225.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 214.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 212.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 210.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 205.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 203.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 203.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 201.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 198.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 198.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 195.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 194.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 192.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 192.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 187.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 187.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 184.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 183.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 182.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 178.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 178.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 177.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 176.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 175.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 174.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 173.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 172.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 172.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 169.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 168.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 168.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 168.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 167.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 165.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 165.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 165.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 164.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 163.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 163.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 163.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 162.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 162.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 162.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 161.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 160.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 159.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 158.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 158.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 158.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 157.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 156.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 156.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 154.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 154.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 153.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 153.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 152.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 152.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 150.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 150.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 150.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 150.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 150.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 150.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 149.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 149.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 149.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 149.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 149.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 149.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 148.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 148.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 146.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 146.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 146.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 146.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 146.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 145.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 145.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 144.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 144.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 144.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 144.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 144.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 144.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 143.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 143.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 143.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 142.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 141.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 141.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 141.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 141.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 141.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 140.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 140.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 140.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 140.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 139.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 138.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 138.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 137.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 137.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 137.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 137.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 137.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 137.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 136.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 136.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 136.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 135.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 135.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 135.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 135.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 135.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 134.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 134.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 134.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 133.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 133.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 132.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 132.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 132.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 131.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 130.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 130.7
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 130.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 130.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 130.0
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 129.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 129.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 129.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 129.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 128.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 128.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 127.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 127.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 127.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 126.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 126.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 126.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 126.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 125.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 124.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 124.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 123.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 123.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 123.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 122.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 122.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 122.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 122.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 122.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 121.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 121.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 121.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 120.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 120.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 120.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 120.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 120.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 120.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 119.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 119.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 119.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 119.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 118.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 118.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 118.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 117.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 117.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 116.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 116.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 116.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 115.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 115.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 115.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 114.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 114.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 114.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 114.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 113.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 113.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 113.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 112.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 112.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 112.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 112.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 112.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 112.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 111.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 111.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 110.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 110.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 110.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 109.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 109.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 109.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 109.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 109.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 109.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 108.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 108.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 108.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 107.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 107.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 107.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 107.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 107.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 106.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 106.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 105.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 105.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 105.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 104.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 104.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 103.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 103.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 102.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 102.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 102.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 102.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 101.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 101.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 101.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 100.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 99.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 98.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 97.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 96.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 95.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 94.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 94.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 91.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 90.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 90.1
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 89.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 89.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 87.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 87.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 85.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 85.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 85.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 82.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 79.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 78.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 76.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 73.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

190.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 190.2
Samples: 4

Max nTPM: 218.2
Min nTPM: 160.3
Sample A Female 218.2
Sample B Female 194.6
Sample C Male 187.7
Sample D Male 160.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

842.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 842.7
Samples: 4

Max nTPM: 901.5
Min nTPM: 801.5
Sample A Male 801.5
Sample B Male 901.5
Sample C Female 853.5
Sample D Female 814.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

27.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 27.3
544902 Antisense, RP_040420_01_H11, Mouse strain C57BL/6J (56 days, male) 28.9
75694901 Antisense, RP_060518_04_A09, Mouse strain C57BL/6J (56 days, male) 25.7

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