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MKNK2
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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:23.5 nTPM
HPA Brain:99.8 nTPM
GTEx:23.5 nTPM
FANTOM5:92.7 Scaled Tags Per Million
Pig:11.7 nTPM
Mouse:21.5 nTPM
Allen mouse:0.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA021875Antibody CAB037253
Glial cells LowNot detected
Neuronal cells LowMedium




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

99.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 78.6
1781 Male, age 74, unknown 119.6
2289 Male, age 61, right hemisphere 114.1
2481 Female, age 94, left hemisphere 76.7
2846 Female, age 79, unknown 72.7
2290 Female, age 72, unknown 70.3
1854 Male, age 80, left hemisphere 59.4
1857 Female, age 85, left hemisphere 59.3
2288 Male, age 75, left hemisphere 56.4
Globus pallidus, externus
nTPM: 99.8
2646 Male, age 61, right hemisphere 157.3
2567 Female, age 72, unknown 102.0
2772 Female, age 79, unknown 88.2
1996 Male, age 80, right hemisphere 86.2
2395 Male, age 75, both hemispheres 65.4
Globus pallidus, internus
nTPM: 81.5
2778 Female, age 91, both hemispheres 99.3
2037 Male, age 80, right hemisphere 88.4
2566 Female, age 72, unknown 87.3
2483 Female, age 94, right hemisphere 80.9
1818 Male, age 74, unknown 77.4
2111 Female, age 85, right hemisphere 69.3
2287 Male, age 75, right hemisphere 68.3
Nucleus accumbens
nTPM: 64.5
1806 Female, age 85, left hemisphere 76.4
1783 Male, age 74, unknown 73.4
2391 Female, age 94, left hemisphere 72.6
2732 Male, age 80, right hemisphere 71.4
2286 Male, age 75, left hemisphere 61.8
2698 Female, age 72, unknown 57.6
2824 Male, age 61, right hemisphere 52.0
1856 Female, age 91, right hemisphere 50.7
Nucleus basalis of Meynert
nTPM: 85.7
2569 Male, age 61, both hemispheres 161.5
2821 Male, age 75, both hemispheres 72.2
2484 Female, age 94, left hemisphere 59.6
2393 Male, age 80, right hemisphere 49.5
Nucleus of the diagonal band
nTPM: 53.1
1979 Male, age 74, unknown 64.8
1812 Female, age 91, both hemispheres 59.2
2195 Female, age 85, both hemispheres 55.3
2775 Male, age 80, right hemisphere 46.9
2029 Male, age 61, right hemisphere 39.3
Putamen
nTPM: 64.9
2647 Male, age 75, left hemisphere 83.1
2489 Female, age 72, unknown 74.8
2466 Female, age 79, unknown 69.9
1829 Male, age 74, unknown 61.5
1937 Female, age 91, right hemisphere 57.4
2482 Female, age 94, left hemisphere 57.4
1838 Male, age 80, right hemisphere 50.5
Septal nuclei
nTPM: 63.7
2199 Male, age 80, right hemisphere 84.5
2059 Female, age 85, both hemispheres 75.2
2009 Female, age 91, both hemispheres 67.5
2031 Female, age 72, unknown 60.3
2394 Male, age 61, left hemisphere 58.2
2629 Female, age 94, right hemisphere 50.7
1960 Male, age 74, unknown 49.5
Stria terminalis, bed nucleus
nTPM: 48.5
2201 Male, age 74, unknown 54.5
1974 Female, age 91, both hemispheres 47.6
2486 Female, age 94, both hemispheres 43.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

23.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 23.3
Samples: 246

Max nTPM: 332.9
Min nTPM: 2.9
Std nTPM: 31.3
Median nTPM: 16.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 332.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 274.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 157.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 100.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 97.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 95.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 94.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 88.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 86.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 81.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 75.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 67.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 58.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 57.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 54.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 52.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 47.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 47.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 45.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 44.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 43.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 41.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 39.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 37.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 37.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 36.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 35.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 35.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 34.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 32.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 31.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 30.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 30.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 30.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 29.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 29.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 29.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 28.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 27.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 27.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 26.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 26.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 26.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 25.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 25.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 25.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 24.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 24.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 23.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 23.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 23.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 23.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 23.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 22.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 22.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 22.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 22.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 21.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 21.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 21.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 21.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 21.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 21.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 20.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 20.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 20.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 20.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 20.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 20.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 20.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 20.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 20.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 20.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 19.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 19.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 19.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 19.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 19.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 19.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 18.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 18.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 18.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 18.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 18.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 18.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 18.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 18.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 18.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 18.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 18.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 18.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 18.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 18.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 18.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 17.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 17.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 17.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 17.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 17.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 17.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 17.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 17.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 17.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 17.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 17.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 16.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 16.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 16.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 16.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 16.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 16.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 16.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 16.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 16.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 16.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 16.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 16.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 16.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 16.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 16.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 16.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 16.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 16.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 16.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 15.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 15.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 15.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 15.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 15.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 15.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 15.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 15.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 15.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 15.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 15.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 15.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 15.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 15.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 15.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 15.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 15.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 15.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 14.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 14.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 14.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 14.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 14.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 14.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 14.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 14.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 14.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 14.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 14.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 14.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 14.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 14.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 14.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 14.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 14.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 14.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 13.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 13.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 13.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 13.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 13.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 13.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 13.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 13.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 13.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 13.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 13.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 13.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 13.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 13.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 12.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 12.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 12.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 12.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 12.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 12.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 12.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 12.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 12.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 12.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 12.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 12.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 12.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 12.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 12.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 12.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 12.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 12.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 12.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 11.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 11.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 11.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 11.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 11.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 11.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 11.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 11.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 11.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 11.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 10.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 10.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 10.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 10.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 10.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 10.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 10.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 10.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 10.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 10.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 10.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 10.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 10.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 10.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 9.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 9.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 9.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 9.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 9.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 9.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 9.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 9.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 9.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 9.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 9.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 9.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 8.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 8.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 8.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 8.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 8.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 8.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 8.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 8.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 7.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 7.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 7.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 7.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 7.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 6.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 6.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 3.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 2.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 23.5
Samples: 246

Max nTPM: 547.6
Min nTPM: 3.9
Std nTPM: 44.0
Median nTPM: 14.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 547.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 372.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 137.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 123.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 109.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 83.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 75.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 63.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 62.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 61.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 59.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 59.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 59.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 57.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 56.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 55.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 50.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 50.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 49.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 49.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 49.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 49.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 44.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 41.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 41.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 41.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 38.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 37.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 36.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 35.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 32.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 32.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 31.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 30.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 30.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 29.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 28.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 28.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 28.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 27.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 27.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 26.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 26.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 26.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 26.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 26.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 25.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 25.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 25.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 24.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 24.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 24.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 24.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 24.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 24.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 24.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 24.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 23.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 23.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 23.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 23.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 22.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 22.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 22.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 22.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 21.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 21.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 21.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 21.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 21.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 20.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 20.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 20.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 20.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 20.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 19.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 19.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 19.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 18.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 18.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 18.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 18.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 18.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 17.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 17.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 17.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 17.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 17.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 17.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 17.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 17.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 17.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 17.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 16.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 16.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 16.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 16.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 16.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 16.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 15.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 15.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 15.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 15.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 15.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 15.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 15.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 15.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 15.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 15.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 14.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 14.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 14.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 14.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 14.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 14.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 14.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 14.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 14.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 14.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 14.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 14.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 14.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 14.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 14.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 14.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 13.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 13.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 13.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 13.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 13.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 13.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 13.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 13.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 13.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 13.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 13.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 13.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 13.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 13.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 13.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 13.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 13.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 12.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 12.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 12.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 12.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 12.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 12.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 12.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 12.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 12.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 12.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 12.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 12.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 11.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 11.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 11.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 11.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 11.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 11.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 11.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 11.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 11.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 11.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 11.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 11.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 11.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 11.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 11.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 11.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 11.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 11.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 11.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 10.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 10.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 10.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 10.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 10.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 10.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 10.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 10.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 10.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 10.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 10.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 10.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 10.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 10.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 10.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 10.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 10.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 10.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 10.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 10.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 10.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 10.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 10.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 9.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 9.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 9.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 9.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 9.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 9.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 9.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 9.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 9.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 9.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 9.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 9.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 9.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 9.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 9.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 9.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 9.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 9.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 9.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 8.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 8.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 8.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 8.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 8.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 8.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 8.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 8.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 8.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 7.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 7.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 7.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 7.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 7.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 7.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 7.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 7.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 7.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 7.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 7.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 6.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 6.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 6.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 6.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 6.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 5.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 5.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 5.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 5.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 5.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 3.9
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Brain - Putamen (basal ganglia)
Average nTPM: 21.0
Samples: 205

Max nTPM: 138.7
Min nTPM: 3.3
Std nTPM: 18.1
Median nTPM: 16.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 138.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 131.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 112.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 103.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 84.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 73.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 68.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 63.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 60.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 57.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 50.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 50.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 45.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 45.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 35.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 32.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 32.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 31.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 31.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 30.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 29.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 29.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 29.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 28.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 27.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 27.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 27.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 27.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 26.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 26.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 26.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 26.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 25.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 25.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 25.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 25.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 25.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 25.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 24.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 23.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 23.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 22.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 22.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 22.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 22.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 22.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 22.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 22.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 22.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 21.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 21.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 21.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 21.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 21.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 21.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 21.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 21.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 21.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 20.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 20.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 20.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 20.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 20.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 19.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 19.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 19.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 19.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 19.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 19.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 19.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 18.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 18.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 18.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 18.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 18.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 18.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 18.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 18.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 18.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 18.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 17.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 17.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 17.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 17.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 17.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 17.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 17.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 17.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 17.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 17.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 17.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 17.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 17.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 17.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 17.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 17.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 17.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 16.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 16.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 16.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 16.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 16.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 16.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 16.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 16.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 16.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 16.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 15.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 15.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 15.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 15.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 15.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 15.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 15.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 15.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 15.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 15.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 15.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 15.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 15.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 15.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 15.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 15.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 15.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 14.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 14.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 14.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 14.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 14.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 14.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 14.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 14.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 14.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 14.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 14.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 14.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 14.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 14.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 14.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 13.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 13.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 13.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 13.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 13.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 13.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 13.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 13.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 13.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 13.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 13.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 13.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 13.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 13.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 12.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 12.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 12.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 12.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 12.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 12.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 12.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 12.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 12.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 12.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 12.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 12.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 12.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 12.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 12.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 12.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 12.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 11.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 11.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 11.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 11.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 11.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 11.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 11.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 11.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 11.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 11.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 11.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 10.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 10.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 10.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 10.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 10.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 10.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 10.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 10.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 10.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 10.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 10.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 9.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 9.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 9.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 9.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 9.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 8.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 8.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 8.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 7.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 7.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 7.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 4.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 3.3
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

92.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 92.7
FF:10164-103B2 76 years, female 92.7
Nucleus accumbens
Scaled Tags Per Million: 51.6
FF:10037-101F1 23-56 years, mixed 51.6
Putamen
Scaled Tags Per Million: 65.8
FF:10176-103C5 60 years, female 65.8
Globus pallidus
Scaled Tags Per Million: 76.1
FF:10161-103A8 76 years, female 102.8
FF:10175-103C4 60 years, female 49.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

11.7
Pig sample Sample description nTPM
Caudate
nTPM: 11.4
Samples: 4

Max nTPM: 12.7
Min nTPM: 9.5
Sample A Female 9.5
Sample B Female 12.4
Sample C Male 12.7
Sample D Male 10.8
Putamen
nTPM: 10.8
Samples: 4

Max nTPM: 12.0
Min nTPM: 9.3
Sample A Female 11.0
Sample B Female 9.3
Sample C Male 10.8
Sample D Male 12.0
Septum
nTPM: 11.7
Samples: 4

Max nTPM: 12.7
Min nTPM: 10.0
Sample A Female 12.4
Sample B Female 10.0
Sample C Male 12.7
Sample D Male 11.7
Ventral pallidum
nTPM: 10.2
Samples: 4

Max nTPM: 12.9
Min nTPM: 8.0
Sample A Female 8.0
Sample B Female 9.7
Sample C Male 12.9
Sample D Male 10.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 21.6
Samples: 4

Max nTPM: 24.0
Min nTPM: 20.0
Sample A Male 21.6
Sample B Male 24.0
Sample C Female 20.0
Sample D Female 20.6
Septum
nTPM: 12.4
Samples: 4

Max nTPM: 14.8
Min nTPM: 11.3
Sample A Male 14.8
Sample B Male 11.7
Sample C Female 11.9
Sample D Female 11.3
Ventral forebrain
nTPM: 19.9
Samples: 4

Max nTPM: 21.9
Min nTPM: 17.6
Sample A Male 21.9
Sample B Male 17.6
Sample C Female 21.1
Sample D Female 19.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.1
74821702 Antisense, RP_060321_02_C04, Mouse strain C57BL/6J (56 days, male) 0.1
Pallidum
Expression energy: 0.1
74821702 Antisense, RP_060321_02_C04, Mouse strain C57BL/6J (56 days, male) 0.1

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