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NECAB2
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  • SUMMARY

  • TISSUE

  • BRAIN

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  • SUBCELL

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  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • NECAB2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
Tissue methods
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

GTEx:112.8 nTPM
FANTOM5:117.3 Scaled Tags Per Million
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA013998Antibody HPA014144Antibody CAB068211
Glial cells Not detectedNot detectedMedium
Neuronal cells HighHighHigh







CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

112.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 112.8
Samples: 300

Max nTPM: 278.4
Min nTPM: 7.0
Std nTPM: 46.4
Median nTPM: 110.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 278.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 237.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 236.9
GTEX-1JN6P-0011-R5b-SM-G9EPO 60-69 years, male 230.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 223.4
GTEX-1POEN-0011-R5b-SM-F2T9Z 30-39 years, female 211.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 209.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 207.0
GTEX-1KD4Q-0011-R5a-SM-EY5Y8 40-49 years, male 202.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 200.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 197.1
GTEX-12126-0011-R5b-SM-GIN98 20-29 years, male 195.2
GTEX-1RDX4-0011-R5a-SM-F33ZH 50-59 years, female 194.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 193.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 192.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 191.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 191.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 185.4
GTEX-117XS-0011-R5b-SM-GJ3PP 60-69 years, male 184.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 184.0
GTEX-1MCQQ-0011-R5b-SM-GJ3RW 60-69 years, male 183.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 183.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 179.7
GTEX-1LKK1-0011-R5b-SM-EY5YB 50-59 years, female 179.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 178.1
GTEX-1NV8Z-0011-R5a-SM-G8LKX 60-69 years, male 177.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 177.1
GTEX-11EI6-0011-R5a-SM-GINAM 60-69 years, male 176.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 174.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 174.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 172.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 171.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 170.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 169.8
GTEX-11ZU8-0011-R5a-SM-GJ3PY 60-69 years, male 168.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 167.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 167.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 167.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 167.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 167.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 166.0
GTEX-1PIIG-0011-R5b-SM-F341S 30-39 years, male 164.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 164.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 163.1
GTEX-UTHO-0011-R5A-SM-G8W6H 60-69 years, male 162.6
GTEX-1JMLX-0011-R5b-SM-EY5YK 50-59 years, male 162.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 162.4
GTEX-11GSO-0011-R5b-SM-GJ3RA 60-69 years, male 162.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 161.7
GTEX-11GS4-0011-R5a-SM-GINAF 60-69 years, male 161.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 160.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 159.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 158.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 158.5
GTEX-1MA7X-0011-R5a-SM-F341K 60-69 years, male 157.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 157.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 156.8
GTEX-ZYFD-0011-R5a-SM-H6Q7M 50-59 years, male 155.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 154.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 154.5
GTEX-1MJK2-0011-R5b-SM-F3427 50-59 years, male 154.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 153.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 153.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 153.2
GTEX-1LSNL-0011-R5a-SM-F3K49 50-59 years, male 152.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 151.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 150.5
GTEX-111FC-0011-R5a-SM-GIN8L 60-69 years, male 149.8
GTEX-1PPGY-0011-R5a-SM-F33ZV 60-69 years, male 149.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 149.5
GTEX-1LH75-0011-R5b-SM-F2TAO 50-59 years, female 149.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 148.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 148.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 147.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 143.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 143.7
GTEX-11ZUS-0011-R5b-SM-GIN9I 30-39 years, male 141.1
GTEX-1RQEC-0011-R5a-SM-F2TBK 60-69 years, male 140.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 140.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 139.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 139.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 138.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 138.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 137.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 137.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 136.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 135.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 135.2
GTEX-1RQED-0011-R5b-SM-F3K56 60-69 years, male 135.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 134.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 133.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 133.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 133.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 133.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 132.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 132.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 132.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 131.8
GTEX-ZAK1-0011-R5a-SM-GRR32 50-59 years, female 131.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 130.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 130.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 130.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 130.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 129.9
GTEX-ZYY3-0011-R5a-SM-H7OGH 60-69 years, female 129.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 129.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 129.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 128.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 128.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 127.0
GTEX-1JMOU-0011-R5b-SM-EY5ZM 60-69 years, female 126.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 126.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 125.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 124.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 124.9
GTEX-1LVAO-0011-R5a-SM-EY5Y6 60-69 years, male 124.4
GTEX-1N2EE-0011-R5a-SM-EY5YF 60-69 years, male 124.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 124.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 124.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 123.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 123.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 122.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 122.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 122.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 122.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 121.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 120.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 120.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 120.0
GTEX-WHSE-0011-R5A-SM-3P5ZO 20-29 years, male 119.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 119.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 119.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 119.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 118.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 118.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 117.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 117.3
GTEX-14C5O-0011-R5a-SM-G8W84 60-69 years, male 117.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 115.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 115.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 115.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 115.0
GTEX-1JMQK-0011-R5a-SM-G8LKV 60-69 years, male 114.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 112.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 112.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 112.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 111.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 111.4
GTEX-1QMI2-0011-R5b-SM-F3K4S 60-69 years, male 111.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 110.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 110.0
GTEX-1QP6S-0011-R5a-SM-F648S 40-49 years, male 109.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 109.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 109.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 108.6
GTEX-1LSVX-0011-R3a-SM-EXURQ 60-69 years, male 108.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 107.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 106.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 106.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 105.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 105.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 105.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 104.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 104.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 104.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 103.2
GTEX-1KWVE-0011-R5a-SM-G8LLB 30-39 years, male 103.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 102.6
GTEX-11EMC-0011-R5a-SM-GJ3PK 60-69 years, female 101.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 101.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 100.8
GTEX-1N5O9-0011-R5a-SM-F3K46 60-69 years, male 100.5
GTEX-12584-0011-R5b-SM-GIN96 40-49 years, male 100.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 100.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 99.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 99.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 98.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 98.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 98.6
GTEX-1P4AB-0011-R5a-SM-F3K4I 50-59 years, male 97.5
GTEX-1O9I2-0011-R5a-SM-F648P 50-59 years, male 96.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 96.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 96.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 96.3
GTEX-1RAZS-0011-R5b-SM-F341U 50-59 years, male 96.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 95.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 95.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 95.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 95.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 95.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 95.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 94.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 93.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 93.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 93.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 92.9
GTEX-16GPK-0011-R5b-SM-GRR3C 60-69 years, male 92.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 92.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 92.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 91.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 91.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 91.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 91.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 90.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 90.2
GTEX-1NV5F-0011-R5b-SM-F3K3I 60-69 years, female 89.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 88.9
GTEX-1PWST-0011-R5a-SM-F648V 70-79 years, male 88.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 88.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 88.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 87.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 86.6
GTEX-1OJC4-0011-R5b-SM-F3K55 50-59 years, female 85.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 84.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 84.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 84.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 84.6
GTEX-1LVA9-0011-R5a-SM-F6492 50-59 years, male 84.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 84.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 84.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 82.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 82.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 82.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 82.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 81.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 80.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 80.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 79.4
GTEX-ZAJG-0011-R5a-SM-GRR1S 50-59 years, female 77.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 76.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 76.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 76.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 76.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 76.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 75.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 74.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 74.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 73.9
GTEX-1RLM8-0011-R5a-SM-F3K4P 50-59 years, male 73.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 73.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 72.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 72.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 70.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 70.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 69.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 69.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 69.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 69.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 67.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 66.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 66.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 66.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 65.8
GTEX-15RJE-0011-R5b-SM-H6Q7T 40-49 years, male 63.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 63.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 62.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 62.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 61.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 61.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 61.0
GTEX-1117F-0011-R5a-SM-GI4VW 60-69 years, female 60.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 58.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 58.0
GTEX-1192W-0011-R5a-SM-GI4VY 60-69 years, male 55.9
GTEX-13QJC-0011-R5a-SM-GJ3QH 60-69 years, female 55.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 53.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 53.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 52.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 52.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 51.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 50.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 50.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 50.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 49.1
GTEX-1A8G7-0011-R5a-SM-H7OH3 60-69 years, male 48.9
GTEX-1JMQL-0011-R5a-SM-F3424 50-59 years, female 48.4
GTEX-1R46S-0011-R5b-SM-F342A 60-69 years, female 48.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 47.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 46.6
GTEX-14E6C-0011-R5b-SM-G9ERG 40-49 years, male 44.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 43.8
GTEX-15DDE-0011-R5b-SM-7KULJ 50-59 years, female 42.3
GTEX-1QEPI-0011-R5b-SM-F649S 60-69 years, female 40.6
GTEX-1N2EF-0011-R5a-SM-F3K4Y 60-69 years, male 40.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 39.9
GTEX-11TUW-0011-R5b-SM-5BC6Q 60-69 years, male 39.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 38.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 38.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 37.2
GTEX-ZZPT-0011-R5a-SM-GPRX5 50-59 years, male 33.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 31.4
GTEX-1ICLZ-0011-R5a-SM-CMKHM 60-69 years, male 30.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 30.7
GTEX-15UF6-0011-R5a-SM-H7OFA 70-79 years, female 27.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 23.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 23.3
GTEX-13N2G-0011-R5a-SM-5MR33 60-69 years, male 23.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 19.4
GTEX-1LB8K-0011-R5b-SM-G8OKO 50-59 years, male 19.3
GTEX-1CB4J-0011-R5a-SM-9WG5Y 60-69 years, male 7.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

117.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 117.3
FF:10164-103B2 76 years, female 117.3

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