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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:86.6 nTPM
HPA Brain:124.2 nTPM
GTEx:86.6 nTPM
Pig:31.5 nTPM
Mouse:60.0 nTPM
Allen mouse:3.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

124.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 84.1
1961 Female, age 42, unknown 89.9
2226 Male, age 75, left hemisphere 78.3
Dorsomedial nucleus
nTPM: 89.1
2041 Female, age 72, unknown 94.3
1989 Male, age 62, unknown 88.0
2017 Female, age 42, unknown 85.0
Lateral hypothalamic area
nTPM: 96.4
1791 Male, age 80, right hemisphere 112.9
2412 Male, age 62, unknown 110.1
2271 Male, age 75, both hemispheres 83.2
2228 Male, age 66, unknown 79.5
Mammillary body
nTPM: 109.3
2413 Male, age 66, unknown 130.7
1923 Female, age 72, unknown 111.7
1834 Female, age 42, unknown 110.8
1945 Male, age 80, right hemisphere 105.1
1948 Female, age 72, unknown 88.0
Paraventricular nucleus
nTPM: 90.8
2700 Male, age 62, unknown 90.8
Preoptic area
nTPM: 86.2
1861 Female, age 42, unknown 96.0
1907 Male, age 80, right hemisphere 85.4
2414 Female, age 72, unknown 77.2
Supraoptic nucleus
nTPM: 124.2
2043 Male, age 62, unknown 148.1
1894 Female, age 72, unknown 122.5
2835 Female, age 72, unknown 102.0
Ventromedial nucleus
nTPM: 109.6
1982 Female, age 72, unknown 118.0
1822 Female, age 42, unknown 101.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

86.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 86.6
Samples: 257

Max nTPM: 239.9
Min nTPM: 41.9
Std nTPM: 26.0
Median nTPM: 81.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 239.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 201.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 171.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 163.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 161.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 159.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 159.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 158.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 150.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 149.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 149.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 147.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 140.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 140.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 132.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 128.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 127.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 126.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 125.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 122.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 122.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 122.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 120.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 119.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 118.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 116.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 116.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 116.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 114.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 111.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 111.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 110.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 110.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 109.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 109.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 108.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 107.9
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 107.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 105.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 105.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 105.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 104.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 104.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 104.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 104.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 104.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 104.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 103.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 102.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 102.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 101.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 101.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 100.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 100.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 99.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 99.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 99.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 98.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 98.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 98.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 98.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 97.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 95.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 95.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 95.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 95.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 95.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 94.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 94.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 94.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 94.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 94.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 93.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 93.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 93.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 92.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 92.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 91.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 91.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 90.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 90.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 90.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 90.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 90.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 89.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 89.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 89.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 89.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 88.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 88.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 87.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 87.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 87.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 87.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 86.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 86.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 86.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 86.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 86.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 85.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 85.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 85.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 85.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 85.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 85.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 85.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 85.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 84.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 84.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 84.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 84.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 84.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 84.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 84.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 84.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 83.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 83.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 83.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 83.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 83.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 83.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 82.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 82.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 82.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 81.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 81.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 81.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 81.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 81.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 81.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 81.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 81.1
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 80.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 80.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 80.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 80.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 80.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 80.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 80.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 80.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 79.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 79.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 79.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 79.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 79.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 79.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 79.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 79.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 78.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 78.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 78.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 78.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 78.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 78.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 78.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 78.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 77.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 77.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 76.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 76.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 76.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 75.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 75.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 75.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 75.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 75.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 75.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 75.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 75.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 75.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 74.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 74.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 74.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 74.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 74.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 74.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 73.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 73.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 73.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 73.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 73.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 73.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 73.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 73.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 72.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 72.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 72.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 72.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 70.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 70.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 70.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 69.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 69.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 69.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 68.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 68.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 68.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 68.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 68.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 68.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 67.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 67.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 67.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 67.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 67.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 67.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 67.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 66.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 66.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 66.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 66.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 65.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 65.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 65.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 65.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 65.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 65.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 65.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 65.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 65.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 65.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 64.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 64.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 64.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 64.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 63.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 63.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 63.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 63.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 62.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 62.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 62.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 61.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 61.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 60.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 60.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 60.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 60.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 60.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 60.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 57.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 57.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 55.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 55.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 53.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 53.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 53.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 53.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 52.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 50.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 49.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 49.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 48.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 47.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 46.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 45.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 41.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

31.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 31.5
Samples: 4

Max nTPM: 43.3
Min nTPM: 24.2
Sample A Female 43.3
Sample B Female 30.2
Sample C Male 28.3
Sample D Male 24.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

60.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 60.0
Samples: 4

Max nTPM: 69.7
Min nTPM: 52.4
Sample A Male 64.0
Sample B Male 69.7
Sample C Female 54.0
Sample D Female 52.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 3.3
72472769 Antisense, RP_051101_02_D01, Mouse strain C57BL/6J (56 days, male) 4.2
69568974 Antisense, RP_050426_03_B12, Mouse strain C57BL/6J (56 days, male) 2.4

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