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  • SUMMARY

  • TISSUE

  • BRAIN

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  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • SCG3
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

143.387
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:64.4 nTPM
HPA Brain:168.6 nTPM
GTEx:64.4 nTPM
Pig:60.3 nTPM
Mouse:250.8 nTPM
Allen mouse:10.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA006880
Hypothalamus mean intensity 143.387
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 140.503
Mammillary nucleus 3.399
Periventricular hypothalamic nucleus 123.680
Supraoptic nucleus 129.705
Tuberal nucleus 32.985
Ventral tuberomammillary nucleus 75.483
Lateral preoptic area 41.335
Medial preoptic area 105.750
Suprachiasmatic nucleus 132.782
Paraventricular hypothalamic nucleus 123.755
Anterior hypothalamic area, central 55.061
Ventral medial hypothalamic nucleus 36.441
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 108.877
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 93.964
Dorsal medial hypothalamic nucleus 102.349
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

168.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 168.6
2226 Male, age 75, left hemisphere 244.5
1961 Female, age 42, unknown 92.7
Dorsomedial nucleus
nTPM: 56.9
2041 Female, age 72, unknown 70.3
2017 Female, age 42, unknown 54.1
1989 Male, age 62, unknown 46.5
Lateral hypothalamic area
nTPM: 77.2
1791 Male, age 80, right hemisphere 90.8
2228 Male, age 66, unknown 85.8
2271 Male, age 75, both hemispheres 81.1
2412 Male, age 62, unknown 51.2
Mammillary body
nTPM: 59.2
2413 Male, age 66, unknown 85.5
1923 Female, age 72, unknown 63.9
1948 Female, age 72, unknown 56.3
1945 Male, age 80, right hemisphere 50.4
1834 Female, age 42, unknown 40.0
Paraventricular nucleus
nTPM: 64.7
2700 Male, age 62, unknown 64.7
Preoptic area
nTPM: 65.1
1907 Male, age 80, right hemisphere 95.2
1861 Female, age 42, unknown 55.2
2414 Female, age 72, unknown 44.8
Supraoptic nucleus
nTPM: 79.5
1894 Female, age 72, unknown 87.6
2835 Female, age 72, unknown 80.6
2043 Male, age 62, unknown 70.5
Ventromedial nucleus
nTPM: 94.9
1822 Female, age 42, unknown 96.6
1982 Female, age 72, unknown 93.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

64.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 64.4
Samples: 257

Max nTPM: 200.6
Min nTPM: 13.2
Std nTPM: 26.0
Median nTPM: 61.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 200.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 181.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 179.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 147.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 138.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 132.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 121.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 118.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 117.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 116.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 116.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 110.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 107.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 106.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 103.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 101.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 100.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 100.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 97.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 97.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 95.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 94.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 94.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 93.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 92.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 92.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 91.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 90.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 90.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 89.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 89.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 89.0
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 88.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 88.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 88.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 87.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 86.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 86.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 85.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 85.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 84.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 84.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 83.7
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 83.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 83.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 83.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 83.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 82.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 82.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 82.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 82.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 81.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 81.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 80.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 80.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 80.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 80.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 80.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 79.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 79.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 78.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 77.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 77.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 77.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 75.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 75.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 75.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 74.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 73.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 73.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 73.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 73.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 73.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 73.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 72.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 72.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 72.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 72.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 71.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 71.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 71.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 71.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 70.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 70.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 70.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 70.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 70.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 69.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 69.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 69.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 69.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 69.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 68.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 68.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 68.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 68.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 68.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 68.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 68.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 68.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 67.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 67.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 67.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 67.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 67.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 67.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 67.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 67.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 67.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 66.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 66.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 66.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 66.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 66.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 66.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 66.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 65.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 65.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 65.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 65.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 64.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 64.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 64.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 63.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 62.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 61.9
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 61.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 61.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 61.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 61.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 61.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 61.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 61.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 60.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 60.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 60.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 60.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 60.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 59.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 59.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 58.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 58.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 58.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 58.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 58.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 58.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 57.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 57.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 57.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 57.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 57.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 57.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 57.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 57.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 57.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 57.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 57.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 56.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 56.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 56.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 55.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 55.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 54.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 54.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 53.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 53.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 53.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 52.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 52.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 51.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 51.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 51.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 51.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 51.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 51.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 50.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 50.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 50.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 50.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 50.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 50.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 50.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 49.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 49.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 49.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 49.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 48.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 48.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 48.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 48.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 47.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 47.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 47.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 47.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 46.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 46.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 46.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 46.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 45.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 45.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 45.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 44.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 44.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 44.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 44.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 44.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 44.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 44.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 43.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 43.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 43.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 43.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 42.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 42.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 42.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 42.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 41.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 41.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 40.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 40.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 40.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 40.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 38.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 38.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 38.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 37.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 37.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 37.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 37.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 37.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 36.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 36.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 36.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 35.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 35.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 35.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 34.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 34.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 33.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 33.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 32.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 31.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 30.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 30.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 29.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 29.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 27.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 27.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 26.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 26.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 24.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 23.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 21.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 21.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 15.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 14.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 13.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

60.3
Pig sample Sample description nTPM
Hypothalamus
nTPM: 60.3
Samples: 4

Max nTPM: 69.2
Min nTPM: 49.9
Sample A Female 69.2
Sample B Female 49.9
Sample C Male 60.3
Sample D Male 61.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

250.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 250.8
Samples: 4

Max nTPM: 260.7
Min nTPM: 241.5
Sample A Male 253.8
Sample B Male 260.7
Sample C Female 247.0
Sample D Female 241.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 10.9
71608205 Antisense, RP_050927_01_B01, Mouse strain C57BL/6J (56 days, male) 10.9
73718057 Antisense, RP_050927_01_B01, Mouse strain C57BL/6J (56 days, male) 8.8

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