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  • OCIAD1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:166.5 nTPM
HPA Brain:200.8 nTPM
GTEx:166.5 nTPM
Pig:237.2 nTPM
Mouse:437.1 nTPM
Allen mouse:0.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

200.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 200.8
2226 Male, age 75, left hemisphere 252.8
1961 Female, age 42, unknown 148.8
Dorsomedial nucleus
nTPM: 144.6
2041 Female, age 72, unknown 162.2
1989 Male, age 62, unknown 139.8
2017 Female, age 42, unknown 131.9
Lateral hypothalamic area
nTPM: 174.9
2228 Male, age 66, unknown 223.3
1791 Male, age 80, right hemisphere 195.8
2271 Male, age 75, both hemispheres 164.5
2412 Male, age 62, unknown 115.9
Mammillary body
nTPM: 164.3
1923 Female, age 72, unknown 220.0
1948 Female, age 72, unknown 162.8
2413 Male, age 66, unknown 150.1
1834 Female, age 42, unknown 145.8
1945 Male, age 80, right hemisphere 142.9
Paraventricular nucleus
nTPM: 167.4
2700 Male, age 62, unknown 167.4
Preoptic area
nTPM: 153.4
1907 Male, age 80, right hemisphere 198.3
2414 Female, age 72, unknown 131.2
1861 Female, age 42, unknown 130.7
Supraoptic nucleus
nTPM: 171.6
1894 Female, age 72, unknown 197.4
2043 Male, age 62, unknown 169.0
2835 Female, age 72, unknown 148.3
Ventromedial nucleus
nTPM: 175.3
1982 Female, age 72, unknown 197.3
1822 Female, age 42, unknown 153.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

166.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 166.5
Samples: 257

Max nTPM: 354.0
Min nTPM: 74.3
Std nTPM: 39.9
Median nTPM: 165.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 354.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 279.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 272.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 267.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 246.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 244.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 242.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 242.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 241.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 241.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 239.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 238.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 235.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 234.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 234.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 232.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 231.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 230.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 230.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 228.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 226.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 223.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 221.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 220.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 219.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 217.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 216.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 215.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 215.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 214.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 213.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 213.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 212.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 208.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 208.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 207.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 206.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 206.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 205.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 205.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 205.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 204.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 204.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 204.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 203.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 203.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 202.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 202.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 198.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 198.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 198.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 197.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 197.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 196.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 196.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 195.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 194.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 193.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 193.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 193.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 193.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 192.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 192.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 192.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 191.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 190.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 190.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 190.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 189.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 189.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 189.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 189.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 188.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 188.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 187.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 187.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 187.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 185.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 185.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 184.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 183.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 182.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 182.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 181.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 181.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 179.7
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 179.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 179.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 179.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 179.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 179.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 179.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 179.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 178.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 178.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 177.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 177.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 177.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 177.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 175.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 175.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 175.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 175.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 175.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 175.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 174.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 174.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 174.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 174.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 173.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 173.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 172.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 170.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 169.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 169.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 168.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 168.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 168.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 167.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 167.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 167.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 167.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 167.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 166.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 166.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 166.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 166.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 166.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 165.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 165.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 164.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 164.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 164.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 164.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 163.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 163.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 163.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 163.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 163.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 162.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 162.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 161.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 159.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 159.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 159.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 158.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 157.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 157.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 157.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 156.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 156.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 155.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 155.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 154.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 154.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 153.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 153.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 152.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 151.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 151.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 151.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 150.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 149.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 149.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 148.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 148.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 147.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 147.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 147.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 147.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 146.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 146.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 146.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 146.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 145.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 144.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 143.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 143.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 143.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 142.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 142.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 142.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 141.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 140.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 140.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 140.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 139.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 139.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 139.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 138.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 138.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 137.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 136.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 136.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 136.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 135.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 134.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 134.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 134.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 133.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 132.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 132.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 131.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 129.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 129.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 128.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 128.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 128.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 128.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 128.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 127.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 127.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 126.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 125.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 125.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 125.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 124.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 123.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 122.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 121.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 121.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 120.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 119.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 118.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 117.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 117.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 117.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 116.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 116.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 116.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 115.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 115.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 115.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 114.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 114.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 114.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 112.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 112.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 112.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 111.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 109.9
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 109.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 108.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 108.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 108.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 108.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 107.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 107.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 107.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 104.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 104.1
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 103.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 100.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 99.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 96.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 95.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 74.3
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

237.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 237.3
Samples: 4

Max nTPM: 302.1
Min nTPM: 207.4
Sample A Female 302.1
Sample B Female 222.2
Sample C Male 207.4
Sample D Male 217.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

437.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 437.1
Samples: 4

Max nTPM: 468.4
Min nTPM: 398.9
Sample A Male 419.0
Sample B Male 468.4
Sample C Female 462.1
Sample D Female 398.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.1
73512529 Antisense, RP_050913_01_A05, Mouse strain C57BL/6J (56 days, male) 0.1

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