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  • TISSUE

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  • PRPF19
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:85.8 nTPM
HPA Brain:137.8 nTPM
GTEx:85.8 nTPM
Pig:66.6 nTPM
Mouse:168.0 nTPM
Allen mouse:11.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

137.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 137.8
2226 Male, age 75, left hemisphere 156.3
1961 Female, age 42, unknown 119.3
Dorsomedial nucleus
nTPM: 102.8
2041 Female, age 72, unknown 110.8
2017 Female, age 42, unknown 105.5
1989 Male, age 62, unknown 92.1
Lateral hypothalamic area
nTPM: 127.3
2228 Male, age 66, unknown 173.2
1791 Male, age 80, right hemisphere 123.3
2271 Male, age 75, both hemispheres 119.0
2412 Male, age 62, unknown 93.7
Mammillary body
nTPM: 108.8
1923 Female, age 72, unknown 153.7
1948 Female, age 72, unknown 107.0
1834 Female, age 42, unknown 99.7
2413 Male, age 66, unknown 95.9
1945 Male, age 80, right hemisphere 87.5
Paraventricular nucleus
nTPM: 103.6
2700 Male, age 62, unknown 103.6
Preoptic area
nTPM: 107.7
1907 Male, age 80, right hemisphere 126.6
1861 Female, age 42, unknown 102.4
2414 Female, age 72, unknown 94.2
Supraoptic nucleus
nTPM: 88.4
2835 Female, age 72, unknown 99.1
1894 Female, age 72, unknown 88.0
2043 Male, age 62, unknown 78.1
Ventromedial nucleus
nTPM: 109.1
1982 Female, age 72, unknown 116.6
1822 Female, age 42, unknown 101.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

85.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 85.8
Samples: 257

Max nTPM: 168.4
Min nTPM: 39.3
Std nTPM: 21.6
Median nTPM: 86.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 168.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 156.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 139.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 135.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 130.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 129.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 126.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 124.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 124.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 124.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 123.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 123.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 122.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 122.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 119.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 118.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 117.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 115.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 115.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 114.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 114.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 114.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 114.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 113.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 112.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 111.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 111.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 111.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 110.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 110.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 110.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 109.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 109.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 109.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 108.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 108.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 108.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 108.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 108.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 108.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 108.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 107.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 105.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 105.2
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 104.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 104.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 104.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 103.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 103.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 103.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 103.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 103.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 103.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 103.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 102.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 102.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 102.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 101.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 101.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 101.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 100.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 100.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 100.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 100.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 100.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 99.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 99.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 99.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 99.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 99.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 99.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 99.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 98.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 98.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 98.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 97.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 97.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 96.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 96.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 96.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 96.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 96.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 96.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 96.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 96.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 96.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 95.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 95.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 95.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 94.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 94.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 94.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 94.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 94.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 94.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 93.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 93.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 92.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 92.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 92.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 91.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 91.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 91.5
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 91.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 91.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 91.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 91.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 90.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 90.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 90.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 90.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 90.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 90.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 89.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 89.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 89.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 89.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 89.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 89.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 87.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 87.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 87.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 87.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 87.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 86.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 86.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 86.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 86.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 86.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 85.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 85.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 85.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 85.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 84.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 84.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 84.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 84.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 83.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 83.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 82.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 82.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 82.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 82.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 82.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 82.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 82.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 81.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 81.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 81.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 81.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 80.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 80.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 80.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 79.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 79.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 79.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 79.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 78.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 78.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 78.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 77.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 75.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 75.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 75.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 75.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 75.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 75.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 74.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 74.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 74.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 74.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 74.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 74.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 74.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 73.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 73.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 73.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 73.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 73.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 73.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 72.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 72.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 72.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 72.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 72.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 72.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 71.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 71.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 71.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 71.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 71.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 71.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 71.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 70.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 70.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 70.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 70.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 70.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 69.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 69.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 69.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 68.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 68.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 68.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 68.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 67.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 67.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 67.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 66.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 66.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 66.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 66.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 66.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 66.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 65.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 65.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 64.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 63.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 62.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 61.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 61.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 60.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 60.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 60.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 59.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 59.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 58.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 58.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 58.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 57.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 57.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 57.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 56.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 56.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 55.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 55.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 55.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 54.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 53.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 53.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 53.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 52.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 52.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 51.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 50.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 50.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 49.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 48.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 48.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 47.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 45.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 44.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 44.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 44.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 40.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 39.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 39.3
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

66.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 66.6
Samples: 4

Max nTPM: 83.6
Min nTPM: 54.9
Sample A Female 83.6
Sample B Female 63.9
Sample C Male 64.0
Sample D Male 54.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

168.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 168.0
Samples: 4

Max nTPM: 176.0
Min nTPM: 158.1
Sample A Male 171.3
Sample B Male 176.0
Sample C Female 166.5
Sample D Female 158.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 11.7
68191420 Antisense, RP_041129_01_B06, Mouse strain C57BL/6J (56 days, male) 11.7

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