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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
106.1
Sample id
Sample description
nTPM
Amygdala nTPM: 106.1
2695
Female, age 67, right hemisphere
118.4
2514
Male, age 75, right hemisphere
117.1
1987
Female, age 91, left hemisphere
102.0
2814
Male, age 76, right hemisphere
101.4
2517
Female, age 94, left hemisphere
91.6
Basal amygdala nTPM: 84.3
2609
Male, age 75, right hemisphere
127.6
2243
Female, age 91, right hemisphere
94.6
1955
Male, age 76, both hemispheres
85.6
2110
Male, age 80, left hemisphere
84.8
2685
Female, age 94, left hemisphere
70.9
2827
Female, age 67, right hemisphere
42.3
Central amygdala nTPM: 92.4
2515
Male, age 75, right hemisphere
105.5
1905
Male, age 76, both hemispheres
104.1
2239
Male, age 80, left hemisphere
91.3
2701
Female, age 91, right hemisphere
86.9
2826
Female, age 94, left hemisphere
74.3
Corticomedial amygdala nTPM: 87.6
2428
Male, age 75, right hemisphere
108.8
2829
Male, age 80, left hemisphere
102.0
2429
Female, age 94, left hemisphere
94.6
2242
Female, age 91, right hemisphere
94.1
2240
Male, age 76, both hemispheres
79.1
2535
Female, age 67, right hemisphere
46.9
Lateral amygdala nTPM: 82.7
2516
Male, age 75, right hemisphere
124.2
2255
Female, age 91, right hemisphere
90.2
1883
Male, age 76, both hemispheres
87.4
2256
Male, age 80, left hemisphere
79.8
2534
Female, age 94, left hemisphere
68.3
2830
Female, age 67, right hemisphere
46.5
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
67.5
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 67.5
Samples: 181
Max nTPM: 154.7
Min nTPM: 9.9
Std nTPM: 28.9
Median nTPM: 61.9
GTEX-11OF3-0011-R4a-SM-GJ3RB
60-69 years, male
154.7
GTEX-1LB8K-0011-R4b-SM-F6487
50-59 years, male
153.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
130.1
GTEX-1JN1M-0011-R4b-SM-F6494
60-69 years, female
127.5
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
124.6
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
123.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
123.8
GTEX-1117F-0011-R4b-SM-GI4VM
60-69 years, female
118.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
118.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
116.3
GTEX-1LVA9-0011-R4a-SM-F2TA2
50-59 years, male
115.7
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
115.2
GTEX-11GSO-0011-R4b-SM-GJ3R8
60-69 years, male
114.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
112.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
112.0
GTEX-1KWVE-0011-R4a-SM-F3K5X
30-39 years, male
111.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
110.3
GTEX-1RLM8-0011-R4a-SM-F2TBL
50-59 years, male
109.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
108.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
108.4
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
106.5
GTEX-1LKK1-0011-R4b-SM-EY5YA
50-59 years, female
106.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
105.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
103.6
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
103.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
103.5
GTEX-15RJE-0011-R4a-SM-H7OH4
40-49 years, male
102.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
100.2
GTEX-14C5O-0011-R4b-SM-G9ERF
60-69 years, male
97.2
GTEX-1RDX4-0011-R4b-SM-F3K43
50-59 years, female
96.7
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
96.3
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
95.6
GTEX-1O9I2-0011-R4b-SM-F3K4K
50-59 years, male
95.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
95.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
94.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
93.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
92.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
92.5
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
91.7
GTEX-1PIIG-0011-R4a-SM-F2TAQ
30-39 years, male
91.7
GTEX-11NV4-0011-R4a-SM-GI4XC
60-69 years, male
91.6
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
91.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
90.7
GTEX-12WSC-0011-R4a-SM-H6Q8M
50-59 years, male
89.6
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
89.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
88.4
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
88.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
88.1
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
87.4
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
85.6
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
84.3
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
83.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
82.4
GTEX-1JMOU-0011-R4b-SM-EY5ZL
60-69 years, female
82.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
81.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
81.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
81.9
GTEX-13FHO-0011-R4b-SM-H6611
60-69 years, male
81.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
80.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
80.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
80.6
GTEX-1P4AB-0011-R4b-SM-F2T9S
50-59 years, male
80.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
79.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
79.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
79.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
79.0
GTEX-ZYY3-0011-R4a-SM-GQ1CY
60-69 years, female
77.1
GTEX-1OJC4-0011-R4a-SM-F3K54
50-59 years, female
76.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
76.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
76.6
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
75.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
73.6
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
73.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
72.6
GTEX-12ZZY-0011-R4a-SM-GIN9F
60-69 years, male
72.1
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
71.9
GTEX-1POEN-0011-R4b-SM-F3K4O
30-39 years, female
71.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
70.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
70.5
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
70.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
69.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
68.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
67.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
67.3
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
66.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
65.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
65.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
64.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
62.8
GTEX-13QJC-0011-R4a-SM-H65ZP
60-69 years, female
62.2
GTEX-1JMQK-0011-R4a-SM-G8LLQ
60-69 years, male
61.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
61.5
GTEX-1PWST-0011-R4a-SM-F2T9X
70-79 years, male
60.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
60.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
60.2
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
60.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
59.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
59.4
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
59.3
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
58.5
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
58.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
57.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
56.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
56.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
56.2
GTEX-1QP6S-0011-R4b-SM-F33ZY
40-49 years, male
55.0
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
54.6
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
54.2
GTEX-PVOW-0011-R4A-SM-H6Q8O
40-49 years, male
53.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
53.8
GTEX-13PLJ-0011-R4b-SM-GJ3R6
60-69 years, female
53.7
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
53.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
53.2
GTEX-ZZPT-0011-R4a-SM-GPRX4
50-59 years, male
53.2
GTEX-1JMLX-0011-R4a-SM-EY5YJ
50-59 years, male
52.4
GTEX-1LH75-0011-R4a-SM-F2TAM
50-59 years, female
52.4
GTEX-117XS-0011-R4b-SM-GJ3PR
60-69 years, male
52.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
50.9
GTEX-111FC-0011-R4a-SM-GIN8K
60-69 years, male
50.6
GTEX-11ZTS-0011-R4b-SM-GINAQ
60-69 years, female
49.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
49.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
49.6
GTEX-1PPGY-0011-R4a-SM-F3K4F
60-69 years, male
49.3
GTEX-1JJ6O-0011-R4a-SM-EY5YM
60-69 years, male
49.0
GTEX-11DXY-0011-R4b-SM-GI4VR
60-69 years, male
48.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
48.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
48.4
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
47.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
47.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
47.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
46.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
46.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
45.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
45.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
45.1
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
45.1
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
44.8
GTEX-1N2EF-0011-R4a-SM-F341F
60-69 years, male
44.6
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
43.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
42.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
42.2
GTEX-11GS4-0011-R4a-SM-GJ3RJ
60-69 years, male
41.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
41.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
40.9
GTEX-1MJK2-0011-R4a-SM-F3426
50-59 years, male
40.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
40.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
39.7
GTEX-1NV8Z-0011-R4b-SM-G8LMZ
60-69 years, male
39.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
39.0
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
38.6
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
37.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
37.3
GTEX-1R46S-0011-R4b-SM-F2TBF
60-69 years, female
37.0
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
36.9
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
36.5
GTEX-145LU-0011-R4b-SM-5P9K1
50-59 years, male
36.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
35.6
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
35.5
GTEX-147F4-0011-R4b-SM-GJ3R4
50-59 years, male
35.4
GTEX-1QMI2-0011-R4b-SM-F3K4R
60-69 years, male
35.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
35.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
33.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
33.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
33.4
GTEX-11DYG-0011-R4b-SM-GJ3RG
60-69 years, male
33.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
32.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
32.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
31.3
GTEX-1RQEC-0011-R4b-SM-F342C
60-69 years, male
30.9
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
30.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
30.1
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
30.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
28.0
GTEX-14BMV-0011-R4a-SM-H6Q7P
50-59 years, male
27.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
25.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
25.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
23.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
21.8
GTEX-1RQED-0011-R4b-SM-F2I2X
60-69 years, male
18.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
14.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
9.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
59.5
Pig sample
Sample description
nTPM
Amygdala nTPM: 59.5
Samples: 4
Max nTPM: 65.8
Min nTPM: 52.4
Sample A
Female
61.0
Sample B
Female
65.8
Sample C
Male
52.4
Sample D
Male
58.7
AMYGDALA - Mouse RNA-seqi
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
46.2
Mouse sample
Sample description
nTPM
Amygdala nTPM: 46.2
Samples: 4
Max nTPM: 48.8
Min nTPM: 41.9
Sample A
Male
41.9
Sample B
Male
47.3
Sample C
Female
48.8
Sample D
Female
46.9
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.