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  • TISSUE

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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:90.9 nTPM
HPA Brain:104.6 nTPM
GTEx:90.9 nTPM
Pig:73.3 nTPM
Mouse:220.7 nTPM
Allen mouse:4.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

104.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 84.8
2226 Male, age 75, left hemisphere 92.6
1961 Female, age 42, unknown 77.1
Dorsomedial nucleus
nTPM: 81.5
2041 Female, age 72, unknown 92.7
1989 Male, age 62, unknown 76.2
2017 Female, age 42, unknown 75.6
Lateral hypothalamic area
nTPM: 104.6
2228 Male, age 66, unknown 121.0
1791 Male, age 80, right hemisphere 113.7
2271 Male, age 75, both hemispheres 104.7
2412 Male, age 62, unknown 79.1
Mammillary body
nTPM: 93.7
1923 Female, age 72, unknown 110.8
1948 Female, age 72, unknown 96.4
2413 Male, age 66, unknown 93.3
1945 Male, age 80, right hemisphere 92.0
1834 Female, age 42, unknown 76.2
Paraventricular nucleus
nTPM: 88.0
2700 Male, age 62, unknown 88.0
Preoptic area
nTPM: 90.3
1907 Male, age 80, right hemisphere 98.3
2414 Female, age 72, unknown 88.4
1861 Female, age 42, unknown 84.2
Supraoptic nucleus
nTPM: 98.1
1894 Female, age 72, unknown 110.3
2043 Male, age 62, unknown 97.0
2835 Female, age 72, unknown 87.2
Ventromedial nucleus
nTPM: 90.6
1982 Female, age 72, unknown 101.0
1822 Female, age 42, unknown 80.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

90.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 90.9
Samples: 257

Max nTPM: 191.2
Min nTPM: 49.8
Std nTPM: 24.3
Median nTPM: 86.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 191.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 190.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 190.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 187.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 185.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 176.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 172.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 171.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 163.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 153.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 149.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 145.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 143.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 140.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 137.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 130.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 128.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 125.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 124.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 120.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 120.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 119.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 118.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 118.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 118.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 117.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 117.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 116.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 116.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 114.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 113.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 113.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 112.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 111.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 109.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 108.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 108.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 108.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 107.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 105.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 105.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 104.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 104.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 104.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 103.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 103.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 102.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 102.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 102.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 102.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 101.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 101.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 100.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 100.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 100.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 100.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 100.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 100.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 99.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 99.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 99.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 99.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 98.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 98.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 98.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 97.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 97.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 97.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 97.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 96.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 96.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 95.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 95.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 95.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 95.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 95.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 95.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 95.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 94.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 93.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 93.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 93.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 93.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 93.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 93.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 92.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 92.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 92.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 91.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 91.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 91.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 91.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 91.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 91.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 91.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 90.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 90.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 90.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 90.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 90.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 90.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 90.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 90.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 90.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 90.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 89.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 89.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 89.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 89.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 88.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 88.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 88.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 88.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 88.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 88.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 88.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 88.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 88.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 88.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 88.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 87.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 87.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 87.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 87.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 87.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 87.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 86.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 86.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 86.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 86.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 85.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 85.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 85.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 85.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 85.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 85.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 85.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 85.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 84.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 84.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 84.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 84.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 84.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 83.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 83.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 83.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 83.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 83.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 83.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 83.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 83.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 83.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 82.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 82.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 81.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 81.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 81.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 81.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 81.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 81.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 80.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 80.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 80.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 80.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 80.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 80.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 80.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 80.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 80.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 80.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 79.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 79.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 79.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 78.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 78.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 78.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 78.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 78.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 78.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 78.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 77.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 77.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 77.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 77.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 76.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 76.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 76.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 76.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 76.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 76.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 75.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 75.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 75.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 75.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 75.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 75.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 75.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 75.1
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 75.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 74.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 74.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 74.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 74.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 73.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 73.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 73.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 73.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 73.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 73.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 73.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 73.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 73.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 73.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 72.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 72.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 72.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 72.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 72.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 72.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 72.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 72.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 71.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 70.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 70.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 70.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 69.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 69.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 69.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 68.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 68.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 68.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 68.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 68.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 68.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 67.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 67.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 67.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 66.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 66.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 66.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 65.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 65.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 65.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 64.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 63.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 63.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 63.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 61.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 61.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 60.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 59.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 59.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 59.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 58.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 58.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 57.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 49.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

73.3
Pig sample Sample description nTPM
Hypothalamus
nTPM: 73.3
Samples: 4

Max nTPM: 90.4
Min nTPM: 65.7
Sample A Female 90.4
Sample B Female 70.9
Sample C Male 66.3
Sample D Male 65.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

220.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 220.8
Samples: 4

Max nTPM: 236.5
Min nTPM: 205.1
Sample A Male 205.1
Sample B Male 235.5
Sample C Female 236.5
Sample D Female 205.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 4.1
68191552 Antisense, RP_041129_01_D07, Mouse strain C57BL/6J (56 days, male) 4.1

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