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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
1.5
nTPM
HPA:
0.9
nTPM
GTEx:
1.5
nTPM
FANTOM5:
2.4
Scaled Tags Per Million
SMALL INTESTINE - Annotated protein expression
Pending normal tissue analysis
SMALL INTESTINE - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
0.9
Male, age 65
Small intestine sample 232 nTPM: 0.8
Cell types%
Glandular cells:
55
Smooth muscle cells:
5
Other cell types:
40
Male, age 39
Small intestine sample 233 nTPM: 1.7
Cell types%
Glandular cells:
40
Smooth muscle cells:
5
Other cell types:
55
Male, age 68
Small intestine sample 234 nTPM: 0.5
Cell types%
Glandular cells:
30
Smooth muscle cells:
15
Other cell types:
55
Male, age 85
Small intestine sample 235 nTPM: 0.8
SMALL INTESTINE - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1.5
GTEx sample id
Sample description
nTPM
Small Intestine - Terminal Ileum Average nTPM: 1.5
Samples: 187
Max nTPM: 6.9
Min nTPM: 0.0
Std nTPM: 1.4
Median nTPM: 1.1
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
6.9
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
6.5
GTEX-1GL5R-2026-SM-7MKHP
50-59 years, male
6.0
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
6.0
GTEX-1QP28-1726-SM-E6CRK
50-59 years, female
5.7
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
5.5
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
5.3
GTEX-ZF29-1626-SM-4WKFJ
60-69 years, female
5.0
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
4.9
GTEX-1HSMQ-2226-SM-C1YRD
50-59 years, male
4.8
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
4.6
GTEX-1QPFJ-2626-SM-DPRZU
30-39 years, female
4.6
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
4.4
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
4.3
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
4.0
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
3.9
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
3.9
GTEX-1MGNQ-2326-SM-EV7BG
40-49 years, male
3.8
GTEX-1LGOU-1426-SM-D3L8N
20-29 years, female
3.6
GTEX-1PIEJ-1526-SM-E6CP8
20-29 years, female
3.4
GTEX-13O61-1326-SM-5KM31
60-69 years, male
3.3
GTEX-18QFQ-1626-SM-72D7H
30-39 years, male
3.2
GTEX-1C475-1426-SM-793CH
40-49 years, female
3.2
GTEX-1F75I-2526-SM-9WPOZ
40-49 years, male
3.1
GTEX-14BMU-1426-SM-5TDE5
20-29 years, female
3.0
GTEX-14PK6-1626-SM-6871I
70-79 years, female
3.0
GTEX-15DZA-0826-SM-6AJBF
30-39 years, female
3.0
GTEX-14PKU-1626-SM-6871C
40-49 years, female
2.8
GTEX-1497J-1926-SM-5TDCC
60-69 years, male
2.7
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
2.7
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
2.6
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
2.5
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
2.5
GTEX-1PDJ9-1826-SM-E9U66
20-29 years, male
2.5
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
2.4
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
2.4
GTEX-17MFQ-1026-SM-7KFSZ
20-29 years, male
2.4
GTEX-1RAZA-1826-SM-DTXA2
20-29 years, male
2.4
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
2.3
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
2.3
GTEX-14XAO-1926-SM-6ETZO
60-69 years, female
2.3
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
2.2
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
2.2
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
2.2
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
2.2
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
2.1
GTEX-16NGA-1126-SM-7KFSY
40-49 years, female
2.1
GTEX-1IKOE-1926-SM-ARU7V
30-39 years, female
2.1
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
2.0
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
2.0
GTEX-1H11D-2526-SM-9JGGU
40-49 years, male
2.0
GTEX-1OJC3-1626-SM-E9U65
20-29 years, male
2.0
GTEX-ZG7Y-1926-SM-DNZZ5
50-59 years, male
2.0
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
1.9
GTEX-1R7EV-1226-SM-DTX82
40-49 years, male
1.9
GTEX-1S5ZA-1326-SM-EV7BB
20-29 years, male
1.9
GTEX-16A39-1426-SM-6LLI6
30-39 years, female
1.8
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
1.8
GTEX-1J8QM-1026-SM-C1YQA
60-69 years, female
1.8
GTEX-1JN76-1126-SM-C1YRL
20-29 years, female
1.8
GTEX-13113-1226-SM-5EGHT
60-69 years, female
1.7
GTEX-1KXAM-2026-SM-DHXKI
60-69 years, male
1.7
GTEX-1QP2A-2426-SM-EXOJA
50-59 years, male
1.7
GTEX-1R9K4-2326-SM-E6CRB
60-69 years, male
1.7
GTEX-1RAZR-1826-SM-E6CRE
40-49 years, male
1.7
GTEX-18A66-2526-SM-7KFTZ
60-69 years, male
1.6
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
1.6
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
1.6
GTEX-14PJN-0826-SM-686ZL
30-39 years, male
1.5
GTEX-16MTA-1526-SM-6LPJB
50-59 years, male
1.5
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
1.5
GTEX-1H1DE-1426-SM-9JGHV
20-29 years, male
1.5
GTEX-1L5NE-1826-SM-EV79T
50-59 years, male
1.5
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
1.4
GTEX-14PJ6-1726-SM-6AJBN
60-69 years, female
1.4
GTEX-1JJE9-2226-SM-CXZJM
70-79 years, male
1.4
GTEX-1RAZQ-2226-SM-DPRZR
30-39 years, male
1.4
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
1.3
GTEX-183FY-1626-SM-793D8
20-29 years, male
1.3
GTEX-1AX8Z-2526-SM-731E3
60-69 years, male
1.3
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
1.3
GTEX-WHSB-1026-SM-4M1XN
50-59 years, male
1.3
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
1.3
GTEX-1LBAC-1526-SM-CXZKU
20-29 years, male
1.3
GTEX-1MUQO-2426-SM-EAZ5A
60-69 years, male
1.3
GTEX-1NSGN-2126-SM-DPRYN
50-59 years, male
1.3
GTEX-11TUW-1926-SM-5BC58
60-69 years, male
1.2
GTEX-1GMR3-2726-SM-7MKFB
40-49 years, male
1.2
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
1.2
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
1.2
GTEX-1R7EU-1326-SM-E6CQ6
60-69 years, male
1.2
GTEX-ZLWG-1626-SM-DNZZ1
50-59 years, female
1.2
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
1.1
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
1.1
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
1.1
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
1.1
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
1.0
GTEX-1CB4F-1826-SM-7MGXI
60-69 years, male
1.0
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
0.9
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
0.9
GTEX-14PN3-2026-SM-68729
60-69 years, female
0.9
GTEX-1CAMR-0826-SM-7MKFK
20-29 years, male
0.9
GTEX-1GMR2-1026-SM-7MKHJ
50-59 years, male
0.9
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
0.9
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
0.9
GTEX-WY7C-1826-SM-4ONCE
50-59 years, male
0.9
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
0.9
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
0.9
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
0.8
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
0.8
GTEX-1B8KE-1726-SM-7IGMN
50-59 years, male
0.8
GTEX-1C64O-2526-SM-79ONO
60-69 years, male
0.8
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
0.8
GTEX-1JK1U-1226-SM-CNNPN
60-69 years, male
0.8
GTEX-1122O-1326-SM-5H11F
60-69 years, female
0.7
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
0.7
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
0.7
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
0.7
GTEX-14PKV-2026-SM-6AJ9A
20-29 years, female
0.7
GTEX-15G1A-1726-SM-6LPI4
30-39 years, male
0.7
GTEX-WFON-1526-SM-4LVMP
40-49 years, male
0.7
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
0.7
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
0.7
GTEX-1QW4Y-1226-SM-EWRMY
30-39 years, male
0.7
GTEX-1R9K5-2026-SM-E6CPS
50-59 years, male
0.7
GTEX-144GM-1026-SM-79OKU
20-29 years, male
0.6
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
0.6
GTEX-1AMFI-1926-SM-731F2
50-59 years, female
0.6
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
0.6
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
0.6
GTEX-YFCO-1326-SM-664NV
40-49 years, male
0.6
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
0.6
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
0.6
GTEX-1J8Q3-2526-SM-CNNQ4
60-69 years, male
0.6
GTEX-1K9T9-2726-SM-D4P3E
50-59 years, female
0.6
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
0.5
GTEX-13111-1426-SM-5DUW3
50-59 years, male
0.5
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
0.5
GTEX-14PJ3-1326-SM-664O7
50-59 years, male
0.5
GTEX-17HHE-1726-SM-79OKT
50-59 years, male
0.5
GTEX-1EMGI-2826-SM-7IGMR
60-69 years, male
0.5
GTEX-ZAB5-1526-SM-5HL9P
50-59 years, male
0.5
GTEX-ZDTT-1726-SM-5HL69
60-69 years, male
0.5
GTEX-11LCK-1926-SM-5A5KE
30-39 years, male
0.4
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
0.4
GTEX-16AAH-1426-SM-7KFTR
50-59 years, male
0.4
GTEX-1B8KZ-1126-SM-7IGLX
50-59 years, male
0.4
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
0.4
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
0.4
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
0.4
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
0.4
GTEX-ZTSS-0926-SM-59865
40-49 years, male
0.4
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
0.4
GTEX-1OKEX-1126-SM-DTXEB
60-69 years, male
0.4
GTEX-1QCLZ-2126-SM-EWRNC
60-69 years, female
0.4
GTEX-1S82Z-1826-SM-E9TIK
30-39 years, female
0.4
GTEX-111YS-1426-SM-5GID8
60-69 years, male
0.3
GTEX-WYJK-1526-SM-4ONCW
50-59 years, male
0.3
GTEX-XPVG-1726-SM-4B65W
50-59 years, male
0.3
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
0.3
GTEX-1I1GT-1826-SM-ARZLW
60-69 years, female
0.3
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
0.2
GTEX-117YX-0326-SM-5GICL
50-59 years, male
0.2
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
0.2
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
0.2
GTEX-14C39-1826-SM-5ZZW4
40-49 years, male
0.2
GTEX-1CAMS-2426-SM-7DHMV
40-49 years, female
0.2
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
0.2
GTEX-Y111-2226-SM-4SOJB
50-59 years, male
0.2
GTEX-Y3I4-1326-SM-4TT8Z
50-59 years, male
0.2
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
0.2
GTEX-1JMQK-2426-SM-CXZJU
60-69 years, male
0.2
GTEX-1192X-2526-SM-59868
50-59 years, male
0.1
GTEX-13W3W-2026-SM-5K7UL
60-69 years, female
0.1
GTEX-17KNJ-1626-SM-718AL
50-59 years, male
0.1
GTEX-Y5V5-1826-SM-4VDS5
60-69 years, female
0.1
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
0.1
GTEX-15EU6-1826-SM-7PC1W
50-59 years, male
0.1
GTEX-1LH75-1926-SM-DIPGD
50-59 years, female
0.1
GTEX-1R9PM-1626-SM-DPRY9
20-29 years, male
0.1
GTEX-131XE-0926-SM-5HL7J
50-59 years, male
0.0
GTEX-13NYB-1826-SM-5J1N3
40-49 years, male
0.0
GTEX-13X6H-1826-SM-7EWCZ
50-59 years, female
0.0
GTEX-1BAJH-2526-SM-7IGOT
70-79 years, male
0.0
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
0.0
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
0.0
GTEX-1R9JW-1926-SM-EVR4J
30-39 years, female
0.0
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SMALL INTESTINE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
