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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
1027.5
nTPM
HPA Brain:
340.8
nTPM
GTEx:
1027.5
nTPM
FANTOM5:
283.9
Scaled Tags Per Million
Pig:
497.6
nTPM
Mouse:
481.6
nTPM
Allen mouse:
1.5
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
340.8
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 319.7
2586
Male, age 75, left hemisphere
388.2
2666
Male, age 74, left hemisphere
379.2
2411
Female, age 72, unknown
347.5
2019
Male, age 18, unknown
340.3
1870
Female, age 42, unknown
317.4
1827
Male, age 72, unknown
304.1
2828
Female, age 72, unknown
302.4
2219
Male, age 76, both hemispheres
281.5
1833
Male, age 53, unknown
278.2
1830
Male, age 51, unknown
258.0
Dorsal raphe nucleus nTPM: 311.0
2298
Female, age 72, unknown
386.7
2750
Male, age 76, both hemispheres
313.0
2016
Female, age 72, unknown
306.3
1828
Male, age 53, unknown
287.5
2047
Male, age 72, unknown
261.3
Inferior colliculus nTPM: 306.7
2097
Female, age 72, unknown
346.0
1890
Male, age 53, unknown
339.7
2849
Male, age 72, unknown
274.8
1848
Female, age 42, unknown
266.4
Median raphe nucleus nTPM: 279.6
2220
Male, age 76, midline
279.6
Periaquaductal grey, anterior nTPM: 340.8
2502
Female, age 75, unknown
420.2
1795
Male, age 51, unknown
324.4
1947
Male, age 18, unknown
277.6
Periaquaductal grey, dorsal nTPM: 298.5
1840
Male, age 53, unknown
321.9
2464
Female, age 72, unknown
308.5
1831
Male, age 72, unknown
290.1
2850
Male, age 76, both hemispheres
273.7
Periaquaductal grey, lateral nTPM: 265.7
2053
Male, age 18, unknown
295.7
2140
Male, age 76, both hemispheres
277.9
2272
Male, age 74, both hemispheres
223.4
Pretectal area nTPM: 310.9
1816
Male, age 51, unknown
386.3
2007
Male, age 72, unknown
355.6
1817
Female, age 42, unknown
355.4
2316
Male, age 76, right hemisphere
335.7
2224
Female, age 72, unknown
333.8
1815
Male, age 53, unknown
322.0
1944
Female, age 72, unknown
290.7
2825
Male, age 18, unknown
286.2
2407
Male, age 75, both hemispheres
257.8
2667
Female, age 75, unknown
257.3
2273
Male, age 74, both hemispheres
239.1
Red nucleus nTPM: 324.6
2503
Female, age 72, unknown
420.4
2785
Male, age 18, unknown
337.5
1904
Male, age 53, unknown
334.6
2227
Male, age 72, unknown
332.9
1865
Male, age 51, unknown
332.7
1821
Female, age 72, unknown
331.4
2769
Male, age 72, unknown
328.8
2584
Male, age 75, left hemisphere
327.4
2725
Female, age 75, unknown
321.8
2588
Male, age 74, left hemisphere
305.7
1954
Female, age 42, unknown
268.6
2823
Male, age 76, right hemisphere
253.1
Substantia nigra nTPM: 335.0
1851
Male, age 51, unknown
405.8
2665
Male, age 74, both hemispheres
383.8
2241
Male, age 72, unknown
369.5
2409
Female, age 72, unknown
357.6
2699
Male, age 18, unknown
335.9
2590
Female, age 75, unknown
314.1
1916
Female, age 42, unknown
313.6
1889
Female, age 72, unknown
308.2
2583
Male, age 75, right hemisphere
282.5
1941
Male, age 53, unknown
279.1
Superior colliculus nTPM: 325.4
1913
Female, age 42, unknown
364.1
2587
Male, age 74, left hemisphere
357.5
1796
Male, age 53, unknown
339.7
2664
Male, age 75, both hemispheres
338.0
1995
Male, age 72, unknown
334.8
2261
Male, age 18, unknown
330.7
2668
Female, age 75, unknown
327.8
2087
Female, age 72, unknown
323.9
1839
Male, age 51, unknown
278.0
1895
Male, age 76, right hemisphere
259.4
Ventral tegmental area nTPM: 325.3
1915
Female, age 42, unknown
369.3
2021
Male, age 53, unknown
343.4
2410
Female, age 72, unknown
330.5
2223
Female, age 72, unknown
327.3
1942
Male, age 51, unknown
303.2
2218
Male, age 76, both hemispheres
278.0
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
1027.5
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 1027.5
Samples: 139
Max nTPM: 3124.7
Min nTPM: 417.0
Std nTPM: 417.5
Median nTPM: 961.5
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
3124.7
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
2581.3
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
2459.3
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
2274.3
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
2061.8
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
1973.7
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
1930.6
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
1742.9
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
1688.0
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
1622.0
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
1612.0
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
1574.1
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
1573.9
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
1544.3
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
1415.1
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
1412.9
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
1393.4
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
1359.2
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
1333.6
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
1331.5
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
1318.9
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
1318.0
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
1312.3
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
1311.7
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
1303.2
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
1297.9
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
1275.4
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
1255.8
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
1240.0
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
1235.1
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
1227.1
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
1204.8
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
1186.3
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
1184.2
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
1178.9
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
1177.8
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
1147.2
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
1137.5
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
1134.1
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
1134.0
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
1124.8
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
1121.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
1118.7
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
1114.9
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
1113.0
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
1111.2
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
1109.7
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
1104.7
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
1104.2
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
1088.7
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
1085.2
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
1063.7
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
1052.2
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
1051.9
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
1051.8
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
1042.7
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
1036.2
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
1029.7
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
1029.5
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
1028.9
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
1015.4
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
1006.1
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
1005.3
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
990.4
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
988.6
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
973.8
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
964.6
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
964.4
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
961.8
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
961.5
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
958.1
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
944.0
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
934.2
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
906.5
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
905.0
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
902.7
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
881.7
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
879.9
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
877.4
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
876.5
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
857.3
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
855.6
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
855.0
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
851.3
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
850.3
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
835.1
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
819.1
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
812.8
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
807.3
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
804.9
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
803.1
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
800.4
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
792.1
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
792.0
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
790.1
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
783.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
780.9
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
780.2
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
771.3
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
763.5
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
762.3
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
755.9
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
745.8
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
738.4
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
736.4
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
732.7
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
731.8
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
731.7
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
730.8
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
729.5
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
726.0
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
724.8
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
720.6
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
718.3
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
717.3
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
711.2
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
711.2
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
676.0
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
665.1
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
658.3
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
657.6
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
657.2
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
647.1
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
639.6
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
636.4
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
632.8
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
630.4
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
624.5
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
607.4
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
600.9
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
592.0
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
587.2
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
586.3
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
571.9
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
533.7
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
531.9
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
488.5
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
477.2
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
417.0
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
481.6
Mouse sample
Sample description
nTPM
Midbrain nTPM: 481.6
Samples: 4
Max nTPM: 584.1
Min nTPM: 381.0
Sample A
Male
584.1
Sample B
Male
452.6
Sample C
Female
381.0
Sample D
Female
508.8
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.